| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3618 |
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| Symbol | |
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| ID | 6245164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 566700 |
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| End bp | 568439 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595391 |
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| Product | putative oxalyl-CoA decarboxylase |
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| Protein accession | YP_001859803 |
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| Protein GI | 186472461 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR03254] oxalyl-CoA decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000526627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATG TACTTGAGAT CAGACCGCAA GAATCCGCTG AAGAGAACGC ACAACAAATG
ACCGACGGTT TCCACCTCGT CATCGATGCG CTGAAAGCGA ACGATATCGA CACCATTTTT
GGTCTGGTCG GCATTCCTAT TACCGACCTT GCGCGCCTCG CGCAGGCCGA AGGAATGCGC
TTTATCGGTT TCCGTCACGA GCAGCACGCA GGTCACGCAG CCGCCATCGC CGGCTACATG
ACGCAAAAGC CCGGCATCTG TCTCACGGTG TCCGCGCCGG GCTTCCTGAA CGGCCTCACA
GCGCTCGCCA ACGCGACGAC GAACTGCTTC CCGATGATCC TCATCAGCGG ATCAAGCGAA
CGCGAAATCG TCGACCTGCA ACAAGGCGAC TACGAAGAAA TGGATCAGCT GAACGCAGCG
AAGCCGTATG CGAAGGCTGC GTATCGCGTG CTGCACGCTG AGGACATCGG CATCGGCCTC
GCACGCGCCA TCCGCGCTGC CGTGTCGGGC CGTCCGGGCG GTGTGTATCT CGACCTGCCC
GCGAAGCTGC TGGCGCAGAC CATCGACGCC GCGAAGGCGA AGCAGTCGAT CGTCCGTGTG
ATCGACGCGG CGCCGCGCCA GCTGCCCGCC CCGGACTCCG TCAAGCGCGC GATCGATCTG
CTGAAGAGCG CGAAGCGTCC GCTGGTGCTG CTCGGCAAGG GCGCATCGTA TTCGCAGGCC
GACAAGGAAA TTCGCGCATT CATCGAAAAG ACGGGCATTC CGTATCTGCC GATGTCGATG
GCCAAGGGCC TGCTGCCCGA CACGCACGAG CAATCGGCTT CCGCCGCGCG TTCGTTCGTG
CTCGCCGAAT CGGACGTCGT CGTGCTGATC GGCGCGCGCC TGAACTGGTT GCTGGCGCAC
GGCAAGGGCA AGACCTGGGG CAAGCCGAAG CAGTTCGTGC AGATCGATAT CTCGGCGCAG
GAAATGGACA GCAACGTCGC GATTGCGGCG CCCATCGTCG GCGACATCGG TTCATGCGTC
GCATCGCTGC TCGACCAGGT CGGCGACGAT TTCCCGCAGC CGCCGAAGGA ATGGCTCGAC
GCCGTTAGCC AGAAGAAGAA CACGAACCTG GAGAAGATGG CCGCGACGCT CGCGAAGAAT
CCGTCGCCGA TGAACTTCCA CAGCGCGCTG CGCGTGCTGC GCGACATCGT CAAGGAGAAC
CCGGACATCA ACGTGGTGAA CGAAGGCGCG AACACACTGG ACTACGCGCG CGCCATCATC
GACATGTACC AGCCGCGCAA GCGCTTCGAC TCGGGTACGT GGGGCGTGAT GGGTATCGGC
ATGGGCTTCG CGATCGGCGC AGCCGTGACG AGCGGCAAGC AGGTGCTCGC GATCGAAGGC
GATAGCGCGT TCGGCTTCAG CGGCATGGAA CTCGAAACGA TCTGCCGTTA CGAGCTGCCC
GTGTGCACGA TCATCTTCAA CAACAACGGC GTATATCGCG GCACCGACGT GAACCCGACG
GGCGGCAAGG ATGTCGCGCC GACCGTGTTC GTCAAGGACG CGCGCTACGA CAAGATGATC
GAGGCATTCG GCGGTATCGG CTACAACGTG ACGACGCCTG AAGAGCTCGA GAAGGCCGTC
AAGGAAGCCA TCGCTTCCGG AAAGCCGACG CTCATCAACG CAGTGATCGA CGAAGCGGCA
GGCACGGAAA GCGGACGCCT GACCAATCTG AATCCGCAAA GCGCGGCAAT GAAAAAGTAA
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| Protein sequence | MADVLEIRPQ ESAEENAQQM TDGFHLVIDA LKANDIDTIF GLVGIPITDL ARLAQAEGMR
FIGFRHEQHA GHAAAIAGYM TQKPGICLTV SAPGFLNGLT ALANATTNCF PMILISGSSE
REIVDLQQGD YEEMDQLNAA KPYAKAAYRV LHAEDIGIGL ARAIRAAVSG RPGGVYLDLP
AKLLAQTIDA AKAKQSIVRV IDAAPRQLPA PDSVKRAIDL LKSAKRPLVL LGKGASYSQA
DKEIRAFIEK TGIPYLPMSM AKGLLPDTHE QSASAARSFV LAESDVVVLI GARLNWLLAH
GKGKTWGKPK QFVQIDISAQ EMDSNVAIAA PIVGDIGSCV ASLLDQVGDD FPQPPKEWLD
AVSQKKNTNL EKMAATLAKN PSPMNFHSAL RVLRDIVKEN PDINVVNEGA NTLDYARAII
DMYQPRKRFD SGTWGVMGIG MGFAIGAAVT SGKQVLAIEG DSAFGFSGME LETICRYELP
VCTIIFNNNG VYRGTDVNPT GGKDVAPTVF VKDARYDKMI EAFGGIGYNV TTPEELEKAV
KEAIASGKPT LINAVIDEAA GTESGRLTNL NPQSAAMKK
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