Gene Bphy_3554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3554 
Symbol 
ID6245101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp498069 
End bp498524 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID642595328 
Productalkylhydroperoxidase 
Protein accessionYP_001859740 
Protein GI186472398 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.249618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC GCCTCGACTA CACACAGATT GCGCCTGCGG GCGTCAAAGC CCTTGGCGGC 
GTCTATGGCT ACGTCCTGCA GAGCGGCCTG TCGCCGGTTC TCGTCGACCT GGTCTACCTG
CGCGTCTCGC AGATCAACAA CTGCGCCTAT TGCCTGGACA TGCATACACG CGACCTGCTG
AAAAAAGGCG TGAAGGTTGA AAAGCTGGCG CTCGTGCAGG CATGGAGGGA AGCGGGCCAT
CTATTCGACG ACCGCGAGCG TGCAGCACTC GCGTGGGCCG AATCGGTCAC GCTGGTGGCG
CAGACCGGTG TGCCGGACGA GGCCTACGAC GCTGCCCGCG CCGTCTTCAA CGACCGCGAA
CTGGTTGACC TGACCATCGC CATCAGTCTG ATGAACACGT ATAACCGTAT GGCAATCAGC
TTCCGGAACA CGCCGCAGGC CGTGATGGAA ACGTAA
 
Protein sequence
MSKRLDYTQI APAGVKALGG VYGYVLQSGL SPVLVDLVYL RVSQINNCAY CLDMHTRDLL 
KKGVKVEKLA LVQAWREAGH LFDDRERAAL AWAESVTLVA QTGVPDEAYD AARAVFNDRE
LVDLTIAISL MNTYNRMAIS FRNTPQAVME T