Gene Bphy_3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3509 
Symbol 
ID6245065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp445372 
End bp446112 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content56% 
IMG OID642595292 
ProductOmpW family protein 
Protein accessionYP_001859704 
Protein GI186472362 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.694204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGGAATT ACAGTAGAAA GCTTCGTTCT GCGGGCGTGG CGGCTTGTAT CTGCTCGGCT 
GCGCTTGGTG ATAATGCAAG CTCTCAGACG GCGGGAAGCT TTACCGTGGC GACAGGGTGG
CTTCACGTCG CGCCACAGAG TAGTGCGACG CCGCTCACGG TGGAAAGCGT TGGTGGCATG
ACGGTTAATC AGCAGTTGCC TGGTACCGGG GCGCATGCGA CGTCCACGGA TACGATGGGA
ATCACCACCG AGTACTATGT CACCGACCAC GTCGGCGTTG CCACGCTCAT TGGCCTTCCT
CTGACGGTGA ATCTCGTTGG TGATGGCGCC CTTGGGAAGT ATGGAACCCT CGGGTCGACG
CGACCGGTCC CGCCCGCTGT CGTGCTTCGA TATCACCTTT TTGAGGCCCA GTCGAAATTT
CGTCCTTTCG TCGGGTTAGG CGTGAACTAT ACCTGGTTCA CTCAGGTTCG GACAACTAAT
AGCAAGTTCA TCACCGACAA TCTTGGTCCG GGCGGGTCGG CGCACGCATC ACTCAGTTCA
TCCTGGAATC CCGTGTTCGA GATCGGGGCA AATTACGCGA TTACAAAGCA CTGGTCCGTC
GGAGCCGCTG TCGGTTATGT TCCGTTAAAA ACGCACCTTA CGCTGGACGG GACGACGGCT
AATGGAACTC ATATCGTTTC CCGATCGACG ATCCGTATCA ATCCGATTAA CGTTTTTCTG
AACGTCGCGT ATACGTTCTA G
 
Protein sequence
MRNYSRKLRS AGVAACICSA ALGDNASSQT AGSFTVATGW LHVAPQSSAT PLTVESVGGM 
TVNQQLPGTG AHATSTDTMG ITTEYYVTDH VGVATLIGLP LTVNLVGDGA LGKYGTLGST
RPVPPAVVLR YHLFEAQSKF RPFVGLGVNY TWFTQVRTTN SKFITDNLGP GGSAHASLSS
SWNPVFEIGA NYAITKHWSV GAAVGYVPLK THLTLDGTTA NGTHIVSRST IRINPINVFL
NVAYTF