Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3509 |
Symbol | |
ID | 6245065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 445372 |
End bp | 446112 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642595292 |
Product | OmpW family protein |
Protein accession | YP_001859704 |
Protein GI | 186472362 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.694204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGGAATT ACAGTAGAAA GCTTCGTTCT GCGGGCGTGG CGGCTTGTAT CTGCTCGGCT GCGCTTGGTG ATAATGCAAG CTCTCAGACG GCGGGAAGCT TTACCGTGGC GACAGGGTGG CTTCACGTCG CGCCACAGAG TAGTGCGACG CCGCTCACGG TGGAAAGCGT TGGTGGCATG ACGGTTAATC AGCAGTTGCC TGGTACCGGG GCGCATGCGA CGTCCACGGA TACGATGGGA ATCACCACCG AGTACTATGT CACCGACCAC GTCGGCGTTG CCACGCTCAT TGGCCTTCCT CTGACGGTGA ATCTCGTTGG TGATGGCGCC CTTGGGAAGT ATGGAACCCT CGGGTCGACG CGACCGGTCC CGCCCGCTGT CGTGCTTCGA TATCACCTTT TTGAGGCCCA GTCGAAATTT CGTCCTTTCG TCGGGTTAGG CGTGAACTAT ACCTGGTTCA CTCAGGTTCG GACAACTAAT AGCAAGTTCA TCACCGACAA TCTTGGTCCG GGCGGGTCGG CGCACGCATC ACTCAGTTCA TCCTGGAATC CCGTGTTCGA GATCGGGGCA AATTACGCGA TTACAAAGCA CTGGTCCGTC GGAGCCGCTG TCGGTTATGT TCCGTTAAAA ACGCACCTTA CGCTGGACGG GACGACGGCT AATGGAACTC ATATCGTTTC CCGATCGACG ATCCGTATCA ATCCGATTAA CGTTTTTCTG AACGTCGCGT ATACGTTCTA G
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Protein sequence | MRNYSRKLRS AGVAACICSA ALGDNASSQT AGSFTVATGW LHVAPQSSAT PLTVESVGGM TVNQQLPGTG AHATSTDTMG ITTEYYVTDH VGVATLIGLP LTVNLVGDGA LGKYGTLGST RPVPPAVVLR YHLFEAQSKF RPFVGLGVNY TWFTQVRTTN SKFITDNLGP GGSAHASLSS SWNPVFEIGA NYAITKHWSV GAAVGYVPLK THLTLDGTTA NGTHIVSRST IRINPINVFL NVAYTF
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