| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3491 |
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| Symbol | |
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| ID | 6245047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 421323 |
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| End bp | 424481 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642595274 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001859686 |
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| Protein GI | 186472344 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.822048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TTTTTATCGA CCGGCCCATC TTTGCGTGGG TCATTGCAAT CATCCTGATG
CTCGCGGGCA TCGCCTCCAT CTTCAACCTG CCCATCTCGC AGTATCCGAC GATTGCGCCG
CCAGCCGTGC AGATCAGCGC GACGTACCCG GGCGCATCGG CGAAAACGGT TGAAAACACC
GTCACGCAGG TGATCGAACA GCAGATGAGC GGTCTCGACC ATCTGCTGTA CATGTCGTCG
AGCAGCGACG ACTCCGGCAG CGCGACCATC ACGCTGACCT TCGAGGCGGG CACGAACCCG
GACATCGCGC AGGTGCAGGT GCAGAACAAG CTTCAACTCG CGACGCCGCT GCTGCCCGAA
AGCGTGCAGC AGCAGGGCAC GAAGGTCACG AAGTCGAGCA GCAGCTTCCT GCTGGTGATG
GCGTTCGTGT CGACGGACGG CAGCATGGAC CGCTACGACC TCGCGAACTA TGTCGCGTCG
CACGTGGAAG ACCCGGTGAG CCGCGTCAAC GGCGTCGGCA CCGTGCAGCT GTTCGGCTCG
CAGTTCGCGA TGCGCGTCTG GCTCGACGCG AACAAGCTGA ACCAGTACAG CCTCACGCCC
GTCGATGTCG AAACCGCATT GACCAATCAG AACGTGCAGG TCGCGGCGGG CTCGCTCGGC
GGCACGCCTT CCGTGCCTGG CCAGGTGCTG CAGGCGACGA TCACGCAGGC GACCCTGCTG
CAAACGCCCG AGCAGTTCGG CAATGTGCTG CTGAAGGTGA ACCAGGACGG CTCGCAGGTG
CGCGTCAAGG ACGTCGCGCG CATTGAGTTG GGCGGCGAAA ACTACAACTT CGACACCGAG
TACAACGGCC AGCCGACGGC AGGCTTCGGT ATCCAATTGG CGACGGGCGC GAACGCGCTC
GAAACGGCGA CGCTGGTGCG CGCGAAGATC GACCAGTTGT CGAAGAACTT CCCGCACGGC
CTGGTCGTGA AGTATCCGTA CGACACGACG CCGTTCGTGA AGATGTCGAT CGAGGAAGTG
GTGAAGACGC TGCTCGAAGG CATCGTCCTC GTGTTCCTCG TGATGTACCT GTTCCTGCAG
AACCTGCGTG CGACGCTGAT TCCGACAATC GCGGTGCCCG TCGTGCTGCT CGGCACGTTC
GCGATCATGA GCGCGGCCGG CTTCTCGATC AATACGCTGT CGATGTTCGG TCTCGTGCTC
GCCATCGGTC TGCTGGTGGA CGATGCGATC GTGGTCGTGG AGAACGTCGA GCGCGTGATG
TCCGAAGAAG GGCTGTCGCC ACGCGAAGCG ACGCGCAAGG CGATGGGCCA GATCACGGGC
GCACTAGTCG GCGTGGCGCT GGTGCTGTCG GCGGTGTTCG TGCCCGTGGC CTTCTCGGGC
GGCTCGGTGG GCGCGATCTA TCGACAGTTC TCGCTGACGA TCGTCGCCGC GATGGTGTTG
TCCGTGCTGG TCGCGCTGGT TCTCACGCCC GCGTTGTGCG CGACGATTCT CAAGCCGGTA
CCGAAGGGCC ATCACGGCGC GAAGACGGGC TTCTTCGGCT GGTTCAACCG CACCTTCGAC
AATGGCCGCG ACCGCTATCA CAGCGGCGTG CAGCATGTGA TCCGCCGCTC CGGGCGCTGG
CTCGTGCTCT ATGTCGTCGT GATCGTCGCT GTCGGCTTCC TGTTCATGCG TCTGCCGAAG
TCGTTCCTGC CCGATGAAGA TCAGGGCACG ATGTTCGTGC TGGTGCAGAC GCCGCCCGGC
TCGACGCAGG AGACCACGGC GCGCACGCTG AAGAACGTCA CCGACTATCT GCTCAACGAC
GAGAAGGACA TCGTCGAATC CGTCTTCACC GTGAACGGCT TCAGCTTCGC GGGCCGCGGA
CAGAACGCGG GTCTCGCGTT CGTGCGGATG AAGGACTACT CGGTGCGCCA GCATGCCAAC
CAGAAGGTGC AGGCGCTGGT GGGCCGCGTA TTCGGTCATT ACGCGTCATA TAAGGACGCG
ACCGTGCTCG CCGTGAACCC GCCGTCCATT CCGGAACTCG GCACGGCGTC GGGCTTCGAC
TTCGAATTGA CGGACAACGC GTCGCTCGGT CACGAAGCCT TGATGGCGGC GCGCAACCAG
CTGCTCGGCA TGGCCGCGAA GGATCCGTCG CTGGCCCTCG TGCGTCCGAA CGGACTGTCG
GATACGCCGC AGTTCAAGAT CGACATCGAC CGCGAGAAAG CGCAGGCGCT CGGCGTCACG
GTGTCGGATA TCGACCAGAC GTTCTCGATT GCGTGGGCGT CGGCGTACGT AAACAACTTC
CTCGACACCG ATGGCCGCAT CAAGAAAGTT TATCTGCAAG GCGATGCACC GTTCCGCATG
ACGCCGGAAG ACATGAGCAA GTGGTACGTG CGCGGCAGTT CGGGAACCAT GATGCCGCTG
ACGTCGGTGG CGTCGGGCCA CTGGATCTAC GGCTCGCCGA AGCTCGAACG CTACAACGGC
ATCGCATCGG TCGAGCTCCA GGGCCAGGCC GCGGCAGGCA AGAGTACCGG CCAGGCGATG
TCCGCGATGG AAGCGCTGGC CGCGAAGCTG CCGCAAGGCA TTGGCTACGA ATGGACGGGT
CTGTCGTTCC AGGAGCGCCA GTCGGGCTCG CAGGCGCCGA TTCTGTACGG CATTTCAATT
CTCGTCGTGT TCCTGTGTCT CGCCGCGCTG TATGAGAGCT GGTCGATTCC GTTTGCGGTG
ATTCTGGTGG TGCCGCTCGG TGTGATCGGC GCGCTGCTCG CCGTGACGAT GCGCGGGCTC
GAGAACGATG TCTTCTTCCA GGTCGGCCTG CTGACAACGG TCGGTTTGTC CGCGAAGAAC
GCGATTCTGA TCGTCGAGTT TGCGCGCGAG TTGCAGACCA ACGAACGCAT GACGGCCATG
CAGGCCGCAC TGGAAGCGTC GCGTCTGCGT TTGCGTCCGA TCCTGATGAC GTCGCTTGCC
TTCGTGCTCG GCGTGCTGCC GCTCGCGATC AGCAATGGCG CCGGTTCGTC GAGCCAGCAC
GCGATCGGCA CGGGTGTGAT CGGCGGGATG CTGACGGCCA CGTTCCTCGC CGTTTTCATG
ATCCCGATGT TCTACGTCGT GATCCGCTCG AAATTCTCGC GCGACGGCGC GACCCCCAAC
AGCACCGAGC CGGACGTCGA AGAGGAAACG GCTCAGTGA
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGIASIFNL PISQYPTIAP PAVQISATYP GASAKTVENT
VTQVIEQQMS GLDHLLYMSS SSDDSGSATI TLTFEAGTNP DIAQVQVQNK LQLATPLLPE
SVQQQGTKVT KSSSSFLLVM AFVSTDGSMD RYDLANYVAS HVEDPVSRVN GVGTVQLFGS
QFAMRVWLDA NKLNQYSLTP VDVETALTNQ NVQVAAGSLG GTPSVPGQVL QATITQATLL
QTPEQFGNVL LKVNQDGSQV RVKDVARIEL GGENYNFDTE YNGQPTAGFG IQLATGANAL
ETATLVRAKI DQLSKNFPHG LVVKYPYDTT PFVKMSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATLIPTI AVPVVLLGTF AIMSAAGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
SEEGLSPREA TRKAMGQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVAAMVL
SVLVALVLTP ALCATILKPV PKGHHGAKTG FFGWFNRTFD NGRDRYHSGV QHVIRRSGRW
LVLYVVVIVA VGFLFMRLPK SFLPDEDQGT MFVLVQTPPG STQETTARTL KNVTDYLLND
EKDIVESVFT VNGFSFAGRG QNAGLAFVRM KDYSVRQHAN QKVQALVGRV FGHYASYKDA
TVLAVNPPSI PELGTASGFD FELTDNASLG HEALMAARNQ LLGMAAKDPS LALVRPNGLS
DTPQFKIDID REKAQALGVT VSDIDQTFSI AWASAYVNNF LDTDGRIKKV YLQGDAPFRM
TPEDMSKWYV RGSSGTMMPL TSVASGHWIY GSPKLERYNG IASVELQGQA AAGKSTGQAM
SAMEALAAKL PQGIGYEWTG LSFQERQSGS QAPILYGISI LVVFLCLAAL YESWSIPFAV
ILVVPLGVIG ALLAVTMRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQTNERMTAM
QAALEASRLR LRPILMTSLA FVLGVLPLAI SNGAGSSSQH AIGTGVIGGM LTATFLAVFM
IPMFYVVIRS KFSRDGATPN STEPDVEEET AQ
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