| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3453 |
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| Symbol | |
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| ID | 6245013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 375896 |
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| End bp | 377194 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642595240 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001859652 |
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| Protein GI | 186472310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAGGT TCAAAGCTTC ATTGTTTGCC GTCGCGCTTT GCGTGGCAGG GACAGCCGCA
CACGCGGCCG ATCTCGTCAC TGTCGTGCAG CAGGCACTCG GTCACGATGC CGATCTCGCG
CAGGCACGCG CAGCTTATGT CGCCGCGCAG GAGGCCGTCC CGCAGGCGCG CGCCGCGTTG
CTGCCGCAGA TTTCCGCCGG CTGGGGGCGC ACTTACAACA GCATCGAGAC AGAGGGCTTT
CCACGTCAGT CGTACTGGCA AAACGGCTGG ACCGTTTCCC TGACGCAGCC GATCTTCGAC
TGGACCCGAT GGGCGGCCTA CCGGCAAGCC GACTATGTCG AGGCGCGTGG CGGCGTCGAC
GTCGGCGCGG CGCAGCAGGC CGCGCTGCTG CGTGCCGTGC GCGCGTATTT CGAAGCACTT
GCTGCGGACG ACGAGGTGAC GCGTACGGCC GACTACCGTG CCGCTGTCGA TGCCCATTGC
CATGTCTTGC AGCGCAACCG CGCGGCCGGC GAGGCGACCG TCGTCGACGT GCGCGAGGCG
CAGACGGCCC TCGACCAGGC GACGCTGCAG CACGCCGACG CCCAGAGCGC GTTGCAGACG
AAGCGCCGTG CGCTCCAGCA GGCGACGGGC GTACCGTTCG ACGCGCTCGC ACGGCTGCCC
GACGGCCTGG CCCTGCCGCG CCTCGTGCCC GAAGACGCGG ATGCATGGGC AGCGCAGGCG
AAGGACCACG GCTACGGGGT CCAGCAAAAG CAACTCGACT GGCAGATCGC GAAGCTCGAT
GTCAGCAAGG CGGAGGGGGC GCACTATCCG TCCGTCTACG CAACGGGCAC GTATACGCCT
GCGGGCGCGG CATCGGGCTA CGCGCGGCCT GCCACGACGA CAACGGGCAT GCTGTCCGTT
TCCATTCCGC TCTACGCGGG TGGCGCGATG CAGTCCAGGG TCCGCGAGAC GCAGGCGTTG
CAGGACAAGG CGCAAGAGGC GCTCGTGAGT GCCGTGCGTG CCGCCGACGC ATCCGCTCGC
GACAACTTTG CGCGCTACCA GGAGGGACGT ACGCGGGTCG AGCTGTTGGC GCGTTTCGTG
GCGTCGTGTC GCGACACGCT TGCGGCGACG CGGATCGGTT ACAAGGTCGG CACGCGCACG
AGTACCGACG TGCTGCGCGC TATCGACATG TTTTACGCGG CGCAGCGCGA CCTGTTCGCC
GCGCGCTACG ACACGGTCGT CGCGCTGATG CTGCTCAAGG GCGATACGTC GACGCTCGGC
CTCACGGATG TCGTGCAGAT CAACGCTGTC CTTCATTGA
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| Protein sequence | MCRFKASLFA VALCVAGTAA HAADLVTVVQ QALGHDADLA QARAAYVAAQ EAVPQARAAL
LPQISAGWGR TYNSIETEGF PRQSYWQNGW TVSLTQPIFD WTRWAAYRQA DYVEARGGVD
VGAAQQAALL RAVRAYFEAL AADDEVTRTA DYRAAVDAHC HVLQRNRAAG EATVVDVREA
QTALDQATLQ HADAQSALQT KRRALQQATG VPFDALARLP DGLALPRLVP EDADAWAAQA
KDHGYGVQQK QLDWQIAKLD VSKAEGAHYP SVYATGTYTP AGAASGYARP ATTTTGMLSV
SIPLYAGGAM QSRVRETQAL QDKAQEALVS AVRAADASAR DNFARYQEGR TRVELLARFV
ASCRDTLAAT RIGYKVGTRT STDVLRAIDM FYAAQRDLFA ARYDTVVALM LLKGDTSTLG
LTDVVQINAV LH
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