Gene Bphy_3413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3413 
Symbol 
ID6244974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp341738 
End bp341953 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content61% 
IMG OID642595201 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_001859613 
Protein GI186472271 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00533865 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTGCA AAGAACGTCT GCTACGCATG CCGGAAGTCG TCAGGCGCAC CGGCATGAGT 
TCGACCACGG TCTATCGCAG GATCAGCGAT GGAACGTTCC CGCGCCCGGT CTCGCTCGGT
TGCAATCGGG TCGCGTGGCT CGAATCGGAG ATCGACGCAT GGATCTTCGC GAGGGTCGAA
GAACGCGAGC GTGATCGAGA AACGGAAGCG GCCTGA
 
Protein sequence
MECKERLLRM PEVVRRTGMS STTVYRRISD GTFPRPVSLG CNRVAWLESE IDAWIFARVE 
ERERDRETEA A