| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3331 |
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| Symbol | |
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| ID | 6244762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 265809 |
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| End bp | 268808 |
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| Gene Length | 3000 bp |
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| Protein Length | 999 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642595121 |
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| Product | sarcosine oxidase alpha subunit family protein |
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| Protein accession | YP_001859533 |
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| Protein GI | 186472191 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.967331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGA AGAACCGCCT CGGCGCCGGT GGGCGCATCA ACCGCGCGAT TCCGCTGACC
TTCACGTTCA ACGGCCGCAC GTATCAAGGC TTTCAGGGCG ACACGCTGGC GTCCGCGCTA
CTCGCGAACG GCGTGCACTT CGTCGCGCGC AGCTTCAAGT ATCACCGGCC GCGCGGCATC
GTCACGGCCG ACGTCGCCGA ACCGAATGCC GTCGTGCAAC TCGAACGCGG CGCCTACACG
GTGCCGAATG CCCGTGCGAC GGAAATCGAG CTGTATCAGG GCCTCGTTGC GACGAGCGTG
AACGCCGAGC CGAACCTCGA GCACGATCGC ATGGCCATCA ATCAGAAGTT CGCGCGCTTC
ATGCCCGCGG GCTTTTACTA CAAGACCTTC ATGTGGCCGG CCAAATGGTG GCCGAAGTAT
GAAGAGAAGA TCCGCGAAGC GGCGGGTCTC GGCAAGGCGC CCGAAGTGCT CGACGCCGAC
CGTTACGACA AGTGCTACGC GCATTGCGAC GTGCTCGTCG TGGGCGGCGG GCCGACGGGT
CTCGCGGCGG CGCATGCGGC GGCCTCGAGC GGCGCGCGTG TGATCCTCGT CGATGACCAG
CGCGAACTCG GCGGCAGCCT GCTGTCGTGC AAGACGGAGA TCGACGGGCA CGCGGCGCTG
AGCTGGGTCG AGAAGATCGA GGCGGAACTA TCGCGCATGC CCGACGTGAA GATCCTTTCG
CGCAGCACGG CATTCGGCTA TCAGGATCAC AACCTCGTCA CGGTGACGCA GCGACTGACG
GATCATCAGC CCGTGTCGAT GCGCAAGGGC ACGCGCGAAC TGCTGTGGAA GATCCGCGCC
AAACGCGTGA TCCTCGCGAC GGGCGCTCAC GAGCGTCCCA TCGTGTTCGG CAACAACGAT
CTGCCGGGTG TGATGCTGGC GTCGGCCGTG TCGACGTATA TCCATCGCTT CGGCGTGATG
CCGGGGCGCA ACGCCGTCGT GTTTACCAAC AACGACGCCG GGTATCGCTG CGCGCTCGAC
ATGAAAGCGT GCGGCGCGAG CGTCACCGTC GTCGACCCGC GTGCGCAAGG CAACGGCGCA
TTGCAGGCAG CCGCGCGCCG TCACGGCGTG AAGATCATGA ACAACGCCGC CGTGATGACC
GCACATGGCA AGCAGCGCGT GACGTCCGTG GAAGTCGTCG CGTATGCGAA CGGCAAGACG
GGCGCGAAGC AGGCTGATCT GCAGTGCGAT CTCGTCGCGA TGTCGGGCGG TTTCAGCCCG
GTGCTGCACC TGTTCGCGCA GTCGGGCGGC AAGGCTCACT GGAACGATAC GAAGGCGTGC
TTCGTGCCGG GCAAGGGCAT GCAGCCGGAA ACGAGCGTCG GCGCAGCGGC GGGCGAATTC
AGCCTTGCAC GCGGCCTGCG TCTTGCCGTC GATGCCGGCG TCGAAGCCGT CAAGTCGATC
GGTTATGCAG TGACGCGTCC GCAGGTGCCG CAGGTGGCCG AGGTCGTCGA GTCGCCGCTG
CAACCGCTGT GGCTCGTCGG CAGCCGGGCA GAAGCGGCGC GCGGTCCGAA GCAGTTCGTC
GACTTCCAGA ACGACGTGTC GGCGGCGGAT ATTCTGCTTG CGGCGCGCGA AGGCTTCGAA
TCCGTCGAGC ACGTGAAGCG CTATACGGCG ATGGGCTTCG GTACGGATCA GGGCAAGCTC
GGCAACATCA ACGGCATGGC GATTCTCGCG GATGCGCTCG GCAAGACGAT TCCCGAAACG
GGCACGACGA CGTTCCGTCC GAACTACACG CCCGTGACCT TCGGCACGTT CGCGGGCCGC
GAGCTCGGCG ATCTTCTCGA CCCGATCCGC AAGACGGCCG TGCACGAATG GCACGTCGAG
AATGGCGCGA TGTTCGAGGA CGTCGGCAAC TGGAAGCGTC CGTGGTACTT CCCGCTGAAG
GGCGAAGACC TGCATGCGGC CGTCAAGCGC GAATGCCTTG CGGTACGCAA CAGCGTCGGC
ATTCTCGATG CATCGACGCT CGGCAAGATC GACATTCAGG GCCCGGATGC GGCGAAGCTG
CTGAACTGGA TGTACACGAA CCCGTGGAGT AAGCTCGAAG TCGGCAAGTG CCGCTACGGC
CTGATGCTCG ACGAGAACGG CATGGTGTTC GATGACGGCG TGACGGTGCG CCTCGCCGAC
CAGCACTTCA TGATGACGAC CACGACGGGC GGCGCGGCGC GAGTGCTGAC ATGGATGGAG
CGCTGGCTGC AGACGGAATG GCCGGACATG AAGGTGCGCC TCGCATCCGT GACCGATCAC
TGGGCGACCT TCGCCGTGGT CGGCCCGAAG AGCCGGAAGG TCGTGCAGAA GGTGTGCAGC
GACATCGACT TCGCCAACGA AGCGTTCCCG TTCATGTCGT ACCGCAACGG CACGGTGGCG
GGTGTGAAGG CGCGTGTGAT GCGCATCAGC TTCTCGGGCG AACTGGCGTA TGAAGTGAAC
GTGCCCGCGA ACATGGGCCG CGCGGTATGG GAGGCGCTGA TGGCCGCGGG CGCCGAATTC
GATATCACGC CCTACGGCAC GGAAACGATG CACGTGCTGC GCGCGGAGAA GGGCTACATC
ATTGTCGGCC AGGATACGGA CGGTTCCGTC ACGCCGCACG ATCTGGGCAT GGGGGGCCTG
GTCGCGAAGA CCAAGGACTT CCTGGGACGC CGTTCGCTTG CGCGTTCGGA TACGACGAAG
GATAACCGCA AGCAGTTCGT CGGCCTGCTG TCCGACGATC CGCAGTTCGT GATTCCCGAA
GGCAGCCAGA TCGTCGCGCG TCCGTTCCAG GGCGACACCG CGCCGATGCT CGGACACGTG
ACGTCCAGCT ACTACAGCCC GATTCTGAAT CGATCGATCG CGCTCGCCGT GGTCAAGGGC
GGCCTGAACA AGATGGGGCA AAGCGTGACG ATTCCGCTGT CGAGCGGCAA GCAGATCGCC
GCGAAGATCG CCAGCCCCGT TTTCTACGAC ACCGAAGGAG TGCGTCAACA TGTGGAATGA
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| Protein sequence | MSQKNRLGAG GRINRAIPLT FTFNGRTYQG FQGDTLASAL LANGVHFVAR SFKYHRPRGI
VTADVAEPNA VVQLERGAYT VPNARATEIE LYQGLVATSV NAEPNLEHDR MAINQKFARF
MPAGFYYKTF MWPAKWWPKY EEKIREAAGL GKAPEVLDAD RYDKCYAHCD VLVVGGGPTG
LAAAHAAASS GARVILVDDQ RELGGSLLSC KTEIDGHAAL SWVEKIEAEL SRMPDVKILS
RSTAFGYQDH NLVTVTQRLT DHQPVSMRKG TRELLWKIRA KRVILATGAH ERPIVFGNND
LPGVMLASAV STYIHRFGVM PGRNAVVFTN NDAGYRCALD MKACGASVTV VDPRAQGNGA
LQAAARRHGV KIMNNAAVMT AHGKQRVTSV EVVAYANGKT GAKQADLQCD LVAMSGGFSP
VLHLFAQSGG KAHWNDTKAC FVPGKGMQPE TSVGAAAGEF SLARGLRLAV DAGVEAVKSI
GYAVTRPQVP QVAEVVESPL QPLWLVGSRA EAARGPKQFV DFQNDVSAAD ILLAAREGFE
SVEHVKRYTA MGFGTDQGKL GNINGMAILA DALGKTIPET GTTTFRPNYT PVTFGTFAGR
ELGDLLDPIR KTAVHEWHVE NGAMFEDVGN WKRPWYFPLK GEDLHAAVKR ECLAVRNSVG
ILDASTLGKI DIQGPDAAKL LNWMYTNPWS KLEVGKCRYG LMLDENGMVF DDGVTVRLAD
QHFMMTTTTG GAARVLTWME RWLQTEWPDM KVRLASVTDH WATFAVVGPK SRKVVQKVCS
DIDFANEAFP FMSYRNGTVA GVKARVMRIS FSGELAYEVN VPANMGRAVW EALMAAGAEF
DITPYGTETM HVLRAEKGYI IVGQDTDGSV TPHDLGMGGL VAKTKDFLGR RSLARSDTTK
DNRKQFVGLL SDDPQFVIPE GSQIVARPFQ GDTAPMLGHV TSSYYSPILN RSIALAVVKG
GLNKMGQSVT IPLSSGKQIA AKIASPVFYD TEGVRQHVE
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