Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3289 |
Symbol | |
ID | 6244720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 216671 |
End bp | 217636 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642595079 |
Product | choline ABC transporter, periplasmic binding protein |
Protein accession | YP_001859491 |
Protein GI | 186472149 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC GCTGGAGAAG TTCGCTTGCC AAGGCCGCGT TGATCTTTTC TGCATTTGGC ATGGCCGTGA CGGGATCGTC GCACGCCGCT GAACCGCAAA GCTGCACACA GGTGCGCATG GCCGATCCCG GCTGGACCGA CATCGATGCG ACGAATGCGG TGGCGGGTGT GCTGCTCAAG GCGCTCGGCT ATCAGCAGAA CGTGTCGAAC CTGTCGGTGC CGATTACCTA TCAGGGCCTG AAAAAAGGTC AAATCGACGT ATTTCTGGGC AACTGGATGC CTGCGCAGGG ACCGCTCGTC AAACCGTTCG TCGACGAGCA CTCGATCGAC GTGCTGCACG CGAATCTGAC CAACGCGAAA TTCACACTTG CCGTGCCGGA CTATGTCGCT GCCGCGGGTG TGCATTCGTT TGCCGATCTC GTCAAACACG CGGATCAGTT CAACGGCAAG ATCTATGGCA TCGAACCGGG CGCACCCGCG AATCAGAACA TCAAGAAGAT GATTGCGGAT AAGGCTTTCG GTCTTGGCGA CTGGAAGGTG GTCGAATCGA GCGAAACGGG CATGCTGACG CAAGTGGAGC GGGCCGTGCG CGACAAGCAG TGGATCGTGT TCCTCGCCTG GGAACCGCAT TTGATGAATA CGAAATTCCA CCTGACGTAT TTGTCGGGCG GCGACGCGTA TTTCGGCCCG AACTACGGCG GCGCGACGGT GAATACGGTT ACGCGTCCGG GCTTTGCCGG GCAGTGCACG AATCTCGCGA AGCTGTTTCA GCAGATGACG TTCAATGTCG ACATGGAGAA CCAGATCATT GCGAACGTTC TGCAAAACAA GGTGGACATC AATACGGCGG CATTGACTGC GCTAAAAGGT AATCCCGCTT TGCTAAATAC GTGGCTTAAA GGTGTGACGA CCACGAACGG TGCGGATGGT TTGCAGGCAG TTCAAACGCA GCTGGGTATT CACTAA
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Protein sequence | MNTRWRSSLA KAALIFSAFG MAVTGSSHAA EPQSCTQVRM ADPGWTDIDA TNAVAGVLLK ALGYQQNVSN LSVPITYQGL KKGQIDVFLG NWMPAQGPLV KPFVDEHSID VLHANLTNAK FTLAVPDYVA AAGVHSFADL VKHADQFNGK IYGIEPGAPA NQNIKKMIAD KAFGLGDWKV VESSETGMLT QVERAVRDKQ WIVFLAWEPH LMNTKFHLTY LSGGDAYFGP NYGGATVNTV TRPGFAGQCT NLAKLFQQMT FNVDMENQII ANVLQNKVDI NTAALTALKG NPALLNTWLK GVTTTNGADG LQAVQTQLGI H
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