| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3288 |
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| Symbol | |
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| ID | 6244719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 215287 |
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| End bp | 216429 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595078 |
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| Product | porin |
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| Protein accession | YP_001859490 |
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| Protein GI | 186472148 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGAATGCCGC AGCACTGACA GGCGTCGCGC TTGCGCTCGC CGGAGTTTCG
AACGCGAGCC ATGCACAAAG CAGTGTCACC CTGTATGGGA TCCTCGACGC AGGCATTACG
TGGGTCAACA ATACGGGTGG CTCGCATGTG GTGAAATTCG ACGACGGCAT TTCTTACGGC
AACCGCTTCG GCATCAAAGG CACGGAAGAT CTCGGCGGCG GACTGGAGGC GGTGTTCGTG
CTCGAAAGCG GCTTTCACCT CGGCAACGGA CAGTTGGGCT TCGGCAGCAC GCTGTTCGGA
CGTCAGGCCT ATGTGGGCCT GAAGAACCAG TGGGGCACGT TGTCGTTCGG CAATCAGCTC
GATATGACGG AAGAGATGGT GTATCTATAC AACGTCTCTG CATGGGCGAG CGGTTATGCA
ATTCACCAGG GCGACTTCGA CCGCTTCAAT GGCGACCGTC TGCCCAATTC GGTGAAGTTC
CTGTCGAATG AATTCGCGGG CTTCATGTTC GGCGGCATGT ATTCGTTTGG CAATGTCGCG
GGCGACTTCC ATCAGGACAG CGCATGGAGC GTCGGCGCGC ATTATGCCAA CGGCCCTTTC
ACGGCGGGCG CGGCTTATAC GCAGCTTAAC AATCCGCACG GCATCTACGC GTTCGATCCT
TATGCGATGC TCGGCGTGCA CACGTTCCTC GGCCAACAGA CGGTCACTGT CGATCCGGCA
ACGGGCGCGA GAACGGATCT CTTCTCGAGC AATCCGTTTC CCGTCGACAA GCAGGGCACG
TTCGGTATCG GTTCGAGCTA CGCAATCGGC GACGTGACGC TGATGGGCAA CTTCACGTAT
ACGACGATCA AGGGCCTCGG CGTCACATCG CACATGAAGG TCGGCGAAGG CGGCGCGAGC
TGGCAGGTAA CGCCGGCCTT CAGCGTGATC GGGGGCTACC AGTACACCAA CTTCGAAGGA
CATCACTGGA ATCAGGGCTC GCTCGGCGCG CACTATCTGC TTTCGAAGCG GACGGATGTC
TATATTTCAG GCGACTATCT GAAGGCCTCG AGCGGCGTGG ATGCGGTGAT CGGCTATAGC
TTCACGCCGT CCACCACGAC GACGCAGGCC GACGTGCGCA TCGGCATGCG CCATTCTTTC
TGA
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| Protein sequence | MKKLNAAALT GVALALAGVS NASHAQSSVT LYGILDAGIT WVNNTGGSHV VKFDDGISYG
NRFGIKGTED LGGGLEAVFV LESGFHLGNG QLGFGSTLFG RQAYVGLKNQ WGTLSFGNQL
DMTEEMVYLY NVSAWASGYA IHQGDFDRFN GDRLPNSVKF LSNEFAGFMF GGMYSFGNVA
GDFHQDSAWS VGAHYANGPF TAGAAYTQLN NPHGIYAFDP YAMLGVHTFL GQQTVTVDPA
TGARTDLFSS NPFPVDKQGT FGIGSSYAIG DVTLMGNFTY TTIKGLGVTS HMKVGEGGAS
WQVTPAFSVI GGYQYTNFEG HHWNQGSLGA HYLLSKRTDV YISGDYLKAS SGVDAVIGYS
FTPSTTTTQA DVRIGMRHSF
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