Gene Bphy_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3225 
Symbol 
ID6244908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp137999 
End bp139459 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content58% 
IMG OID642595019 
Productsuccinic semialdehyde dehydrogenase 
Protein accessionYP_001859431 
Protein GI186472089 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01780] succinate-semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00532289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC TAAATCTCCA CGAACCATTG TTGCTGCGCG AGCAGTGTTA CTTGAACGGT 
GAGTGGTGTG ACGCCGATGA CAGCGAGACA TTTTCAGTGA TGAACCCGGC AACCGGAGCG
GTCATAGCAC ATGTGCCGCG GATGGGGACG CCGGAGACTC GCCGTGCAAT CATGGCTGCC
CAGGAGGCGT GGCCAGCTTG GCGCAAACTC ACTGCGAAAG CACGAGCCGC TATCCTCCGC
ACATGGTTCG AACTGATGCT TGAGCATCAA GACGATCTCG CCAAGATTCT TACGGCCGAG
CAGGGCAAGC CGCTAATTGA AGCAATGGGA GAGATTCTGT ATGGCGCCTC GTTCATCGAG
TGGTTCGCAG AGGAGGCCAA ACGCGCATAT GGGGACATTA TTCCTGCAGT CGCCAGTGAC
CGGAGGATAA TGGTGGTGAA GGGGCCCGTT GGTGTCTGTG CCGCGATCAC ACCGTGGAAT
TTTCCTGCGG CGATGATTAC CCGCAAGGCT GGTCCCGCGC TTGCAGCGGG GTGCCCAATA
ATCGTCAAGC CAGCCGAATC GACTCCACTT ACGGCCTTGG CGTTGGCGGT GCTAGCCGAG
TGGGCAGGCG TACCGGCCGG CATCTTCCAG GTTATCACCG GTGTGCCTCA ACAGATTGGT
GAAGAGATGA CGTCGAACCC CGCCGTTCGA AAGCTCTCTT TCACCGGGTC CACTGCAGTC
GGAGCACGCC TGATGGCGCA GTGCGCCCCG ACGATCAAAA AGCTATCACT TGAACTGGGC
GGCAACGCGC CGTTCATCGT ATTCGATGAC GCAGACCTGG ACGAAGCGGT GGCAGGGGCA
GTCGCGTCCA AATACAGAAA CGCAGGCCAG ACATGTGTAT GCACCAATCG CTTCTATGTG
CACAACGACG TCTACGACTC GTTTGTCTGT AAATTGGCTG ACGCGGTAGC GTTGTTGAAA
GTTGGGCCAG GCACGCAGGA GGGGGTCACA CAGGGGCCGC TCATCAACGA GGATGCCGTC
AAAAAGGTCG AATCGCACGT CAAGGACGCG GTGCTACATG GCGGCCGAAT CGTGAGTGGG
GGAAAGCGCC ACGCTCTCGG GCACAGCTTC TTCGAGCCCA CCATCATTGC CGACGCGACG
CCCGCTATGA AGGTCGCTCG TGAAGAGACC TTTGGTCCGC TCGCTCCCGT ATTTCGCTTC
CATTCCGATG AGGAGGTGGT GTATCTCGCG AACAACACGG AGTTTGGATT GGCAGCGTAC
TTCTACAGCC GCGACATCGG ACGGATCTGG CGGGTGGCGG AAGCGCTTGA ATATGGCATG
GTAGGTGTCA ATACAGGCTT GATTTCCAAC GAGGTCGCGC CGTTTGGTGG GATAAAGCAG
TCTGGCCTGG GTAGAGAGGG TTCGCATTAC GGCCTGGATG AATATCTGGA AACCAAGTAT
CTATGCATCG GCGGTATATA G
 
Protein sequence
MSKLNLHEPL LLREQCYLNG EWCDADDSET FSVMNPATGA VIAHVPRMGT PETRRAIMAA 
QEAWPAWRKL TAKARAAILR TWFELMLEHQ DDLAKILTAE QGKPLIEAMG EILYGASFIE
WFAEEAKRAY GDIIPAVASD RRIMVVKGPV GVCAAITPWN FPAAMITRKA GPALAAGCPI
IVKPAESTPL TALALAVLAE WAGVPAGIFQ VITGVPQQIG EEMTSNPAVR KLSFTGSTAV
GARLMAQCAP TIKKLSLELG GNAPFIVFDD ADLDEAVAGA VASKYRNAGQ TCVCTNRFYV
HNDVYDSFVC KLADAVALLK VGPGTQEGVT QGPLINEDAV KKVESHVKDA VLHGGRIVSG
GKRHALGHSF FEPTIIADAT PAMKVAREET FGPLAPVFRF HSDEEVVYLA NNTEFGLAAY
FYSRDIGRIW RVAEALEYGM VGVNTGLISN EVAPFGGIKQ SGLGREGSHY GLDEYLETKY
LCIGGI