Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3225 |
Symbol | |
ID | 6244908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 137999 |
End bp | 139459 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642595019 |
Product | succinic semialdehyde dehydrogenase |
Protein accession | YP_001859431 |
Protein GI | 186472089 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00532289 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAGC TAAATCTCCA CGAACCATTG TTGCTGCGCG AGCAGTGTTA CTTGAACGGT GAGTGGTGTG ACGCCGATGA CAGCGAGACA TTTTCAGTGA TGAACCCGGC AACCGGAGCG GTCATAGCAC ATGTGCCGCG GATGGGGACG CCGGAGACTC GCCGTGCAAT CATGGCTGCC CAGGAGGCGT GGCCAGCTTG GCGCAAACTC ACTGCGAAAG CACGAGCCGC TATCCTCCGC ACATGGTTCG AACTGATGCT TGAGCATCAA GACGATCTCG CCAAGATTCT TACGGCCGAG CAGGGCAAGC CGCTAATTGA AGCAATGGGA GAGATTCTGT ATGGCGCCTC GTTCATCGAG TGGTTCGCAG AGGAGGCCAA ACGCGCATAT GGGGACATTA TTCCTGCAGT CGCCAGTGAC CGGAGGATAA TGGTGGTGAA GGGGCCCGTT GGTGTCTGTG CCGCGATCAC ACCGTGGAAT TTTCCTGCGG CGATGATTAC CCGCAAGGCT GGTCCCGCGC TTGCAGCGGG GTGCCCAATA ATCGTCAAGC CAGCCGAATC GACTCCACTT ACGGCCTTGG CGTTGGCGGT GCTAGCCGAG TGGGCAGGCG TACCGGCCGG CATCTTCCAG GTTATCACCG GTGTGCCTCA ACAGATTGGT GAAGAGATGA CGTCGAACCC CGCCGTTCGA AAGCTCTCTT TCACCGGGTC CACTGCAGTC GGAGCACGCC TGATGGCGCA GTGCGCCCCG ACGATCAAAA AGCTATCACT TGAACTGGGC GGCAACGCGC CGTTCATCGT ATTCGATGAC GCAGACCTGG ACGAAGCGGT GGCAGGGGCA GTCGCGTCCA AATACAGAAA CGCAGGCCAG ACATGTGTAT GCACCAATCG CTTCTATGTG CACAACGACG TCTACGACTC GTTTGTCTGT AAATTGGCTG ACGCGGTAGC GTTGTTGAAA GTTGGGCCAG GCACGCAGGA GGGGGTCACA CAGGGGCCGC TCATCAACGA GGATGCCGTC AAAAAGGTCG AATCGCACGT CAAGGACGCG GTGCTACATG GCGGCCGAAT CGTGAGTGGG GGAAAGCGCC ACGCTCTCGG GCACAGCTTC TTCGAGCCCA CCATCATTGC CGACGCGACG CCCGCTATGA AGGTCGCTCG TGAAGAGACC TTTGGTCCGC TCGCTCCCGT ATTTCGCTTC CATTCCGATG AGGAGGTGGT GTATCTCGCG AACAACACGG AGTTTGGATT GGCAGCGTAC TTCTACAGCC GCGACATCGG ACGGATCTGG CGGGTGGCGG AAGCGCTTGA ATATGGCATG GTAGGTGTCA ATACAGGCTT GATTTCCAAC GAGGTCGCGC CGTTTGGTGG GATAAAGCAG TCTGGCCTGG GTAGAGAGGG TTCGCATTAC GGCCTGGATG AATATCTGGA AACCAAGTAT CTATGCATCG GCGGTATATA G
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Protein sequence | MSKLNLHEPL LLREQCYLNG EWCDADDSET FSVMNPATGA VIAHVPRMGT PETRRAIMAA QEAWPAWRKL TAKARAAILR TWFELMLEHQ DDLAKILTAE QGKPLIEAMG EILYGASFIE WFAEEAKRAY GDIIPAVASD RRIMVVKGPV GVCAAITPWN FPAAMITRKA GPALAAGCPI IVKPAESTPL TALALAVLAE WAGVPAGIFQ VITGVPQQIG EEMTSNPAVR KLSFTGSTAV GARLMAQCAP TIKKLSLELG GNAPFIVFDD ADLDEAVAGA VASKYRNAGQ TCVCTNRFYV HNDVYDSFVC KLADAVALLK VGPGTQEGVT QGPLINEDAV KKVESHVKDA VLHGGRIVSG GKRHALGHSF FEPTIIADAT PAMKVAREET FGPLAPVFRF HSDEEVVYLA NNTEFGLAAY FYSRDIGRIW RVAEALEYGM VGVNTGLISN EVAPFGGIKQ SGLGREGSHY GLDEYLETKY LCIGGI
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