| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3096 |
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| Symbol | trmE |
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| ID | 6244575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3474237 |
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| End bp | 3475637 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594898 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_001859310 |
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| Protein GI | 186477840 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000000134747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGCCA CAGATTCCGA TCCGATCGTC GCCATTGCTA CCGCGCCCGG CCGCGGCGGT
ATAGGGGTCG TGCGCATCTC GCTCGGACGC GCCGGCGAGG CCGCAGCGCA GCCGATGATG
CAGGCGTTGT CCGGGCAGAC GTGGACGCCG CGCCATGCCA GCTACGTTCC CTTTCTGGAT
GGCGGCGGTA ACGCGCTCGA TCGCGGTATC GCGCTGTACT TTCCCGCGCC GCACTCATAC
ACGGGGGAGC ACGTGCTCGA GCTGCAAGGG CACGGCGGTC CGATCGTACT TCAGCTTGTT
TTGCAACGCT GCATCGATGC CGGACAGGCG TTCGGATTGC GTCTCGCGGA ACCGGGCGAG
TTCACGCGTC GCGCATTTCT CAATGACAAG CTCGATCTCG CGCAGGCCGA AGCAGTTGCC
GATCTGATCG AGGCCAGCAC GGAAGCCGCC GCGCGATCGG CGGGACGTTC GCTCGAAGGT
GCGTTCTCGC GCGATATTCA TGCGCTGGTC GAAGACGTGA TCACGCTGCG GATGCTCGTC
GAGGCGACCC TGGATTTTCC GGAAGAAGAA ATCGATTTCC TCGAAGCCGC CGACGCGCGC
GGGAAGCTTG CGCGCATTCG CGAGCGTCTT GCGCTCGTGC TAAGTGAGGC GCGCCAGGGC
GCGTTGCTGC GCGAAGGCTT GTCGGTAGTG CTGGCTGGGC AGCCGAATGT CGGCAAATCG
TCGCTGCTCA ATGCGCTGGC CGGCGCGGAG CTCGCGATCG TCACGCCGAT TGCGGGCACG
ACCCGAGACA AGGTTGCACA GACCATACAG GTGGAAGGCA TCCCGCTGCA CGTGATCGAC
ACGGCAGGGT TGCGCGAGAC GGAAGACGAA GTCGAGAAGA TCGGCATCGA GCGGACGTGG
GGCGAAATCG AGCGCGCGGA CGTCGTGCTG CATCTGCTCG ACGCACGTTC GGGCATGACG
GACGACGACG AAGCGATCGC CGCGCGCTTT CCGGCGGGCG TGCCCGTCGT GCGTGTCCTG
AACAAGACGG ACCTGACGGG CGCTGCTCCG CATGTCGAGA AGTTGAACGC GTCAGGCGAG
CCCGACTTAT GCGAGGTTCG ACTGTCGGCA AAGATGGGCG ACGGCATCAG CCTGCTGCGC
GGCGAACTGC TACGCATTGC CGGCTGGCAG GCGGGCGCGG AAAGCGTTTA TCTCGCGCGC
GAACGCCATC TGATTGCGCT TCGGGCCGCG CAAAATCATC TCGGGCTTGC CGCGGAGCAC
GCGGATCAGA ACGCGCAAGC GCTCGATCTC TTCGCGGAAG AACTGCGTCT GGCGCAGGAT
CAACTCAACT CCATCACCGG CGAATTCACT TCCGACGATC TGCTTGGCGT GATTTTCAGC
AGGTTTTGTA TCGGCAAGTG A
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| Protein sequence | MIATDSDPIV AIATAPGRGG IGVVRISLGR AGEAAAQPMM QALSGQTWTP RHASYVPFLD
GGGNALDRGI ALYFPAPHSY TGEHVLELQG HGGPIVLQLV LQRCIDAGQA FGLRLAEPGE
FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLEG AFSRDIHALV EDVITLRMLV
EATLDFPEEE IDFLEAADAR GKLARIRERL ALVLSEARQG ALLREGLSVV LAGQPNVGKS
SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ VEGIPLHVID TAGLRETEDE VEKIGIERTW
GEIERADVVL HLLDARSGMT DDDEAIAARF PAGVPVVRVL NKTDLTGAAP HVEKLNASGE
PDLCEVRLSA KMGDGISLLR GELLRIAGWQ AGAESVYLAR ERHLIALRAA QNHLGLAAEH
ADQNAQALDL FAEELRLAQD QLNSITGEFT SDDLLGVIFS RFCIGK
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