| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3077 |
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| Symbol | |
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| ID | 6244556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3456005 |
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| End bp | 3456709 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594879 |
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| Product | putative general secretory pathway protein J |
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| Protein accession | YP_001859291 |
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| Protein GI | 186477821 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000785542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGAA TCGCTCGCTC TGAGCACGAG GTGCCCCGCG GCCGCCGTTC GCTGCTATCG
AGAAAGACAG CGAGCGGCTT CACGCTGATC GAGCTGCTCG TCGCGATTGC GATTCTGGCC
GTGATCGCGG TCCTGTCGTG GCGCGGACTG GATCAGATCA TTCGCGGACG GCAGACGATC
ACGAACGCGA TGGAAGACGA GCGCGTGTTC GCTCAGTTCT TCGATCAGAT GCGCATCGAC
GTGCGCAATG CCGCGTCCGA CGACGAAGCG GGCGAGCCCG CCGTCGCTGT GAACGGCAAT
GCGCTGCAGA TCGTGCGCTA CATGCGCACG CCGGGTGCGC CGCCGCGTCT CGTGGTGGTG
CGGTATCGGA TCATCGAAGG ACGCATCATT CGCTATGCGT CGCCACCGCT GGCGAACATC
GGCGACGTGC GCCGCGCGCT CGGCGGGTCG GAAAGCGGAG ACTGGAACGC CGTGCCTTTG
ATGGGCGGTG TGGGCGCGAT TTCCGCGCGC CTGTATGTGC CGAAAGTCGG CTGGACGACG
CAGATGAAAG ACGTGCAAGC GGCGATCGCG GAGAACGACA ATAACCTGAA GGTGCCTCAG
CTCGGCAATG CGCCGTTGCC GAGGTCGGTA ACGGGGCTCG AGGTGAGCAT TGGCGCGAAT
TCGCTCGCGC GGCCCGTGAC GCGGGTTTTT CTCGTGGGAG AGTGA
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| Protein sequence | MKRIARSEHE VPRGRRSLLS RKTASGFTLI ELLVAIAILA VIAVLSWRGL DQIIRGRQTI
TNAMEDERVF AQFFDQMRID VRNAASDDEA GEPAVAVNGN ALQIVRYMRT PGAPPRLVVV
RYRIIEGRII RYASPPLANI GDVRRALGGS ESGDWNAVPL MGGVGAISAR LYVPKVGWTT
QMKDVQAAIA ENDNNLKVPQ LGNAPLPRSV TGLEVSIGAN SLARPVTRVF LVGE
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