| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3026 |
|---|
| Symbol | atpC |
|---|
| ID | 6244507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3400733 |
|---|
| End bp | 3401158 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594830 |
|---|
| Product | F0F1 ATP synthase subunit epsilon |
|---|
| Protein accession | YP_001859242 |
|---|
| Protein GI | 186477772 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
|---|
| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCA TCAAGGTAGA CGTCGTCAGC GCGGAAGAGC AGATCTTCTC GGGCCAGGCG
AAGTTCGTTG CGCTCCCGGG CGAAGCGGGC GAACTCGGCA TTCTGCCGGG TCACACGCCG
CTCATCACGC GGATTCGTCC GGGTGCGGTG CGCATCGAAT CGGAAAATGG CGAAGAAGAG
TTCGTGTTCG TCGCCGGCGG CATTCTCGAA GTCCAACCGG GCGCAGTGAC GGTGCTGGCC
GACACGGCGA TCCGCGGCAA AGATCTCGAC GAAGCAAAGG CCGAACAGGC TCGCAAGCGC
GCGGAAGAAG CGCTGCAGAA CACCGGCTCG AATCTCGAAT ACGCGACTGC GCAAGCAGAA
CTGGCGTACG CGACGGCTCA GCTGGCAGCG ATTCAGCGTC TGCGCAAGCT GCGCGGACAG
CACTAG
|
|---|
| Protein sequence | MATIKVDVVS AEEQIFSGQA KFVALPGEAG ELGILPGHTP LITRIRPGAV RIESENGEEE
FVFVAGGILE VQPGAVTVLA DTAIRGKDLD EAKAEQARKR AEEALQNTGS NLEYATAQAE
LAYATAQLAA IQRLRKLRGQ H
|
|---|
| |