Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2950 |
Symbol | flgD |
ID | 6244431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 3302900 |
End bp | 3303613 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642594753 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001859166 |
Protein GI | 186477696 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.427206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACTACCA GCACCACTAT CGGCAACAAC GGCGCGACGG TTTCGCAGAC ATTGCTCGAC ACGATGAACG GCGCGAAGAG TGCGTCGTCG TCGAGCAGCT CGTCGAGCGC GACCTCGGGC AGCGACCTGC AGAACACTTT CCTGCAACTG CTCATCGCGC AGATGAAGAA CCAGGATCCG ACGAGCCCGA TGGACAGCTC GCAGATGACC TCTCAGCTCG CGCAGATCAA CACGGTGACG GGCATCGGCC AGCTGAATTC GTCGCTGACC TCGCTCGCTT CGCAACTCAC GACCAACCAG CAAACGCAGG CCGCGAACCT GATCAATTCG ACGGTGCTCG CACCGGGGGA CAGCTTCTCG GTGTCGTCGG GCAAGGCAAC GGGCTTCGGC GTCACGCTCG CCAGCGACGC GACGGACGTG CAGGTCACGG TCAAGAACTC GGCAGGCCAG ATCGTCAACA CGATCGACCT CGGCAAGCAG TCGGCAGGCA CGATTCCCGT CGGCTGGACA CCCGTCGACA AGAGCGGCAA CGCGCTGCCC GACGGCACCT ACACATTCAC GGCAGCCAGC ACGACGGCAA ACGGCACGGG CGCTCCTACC ACGCTGTCGG CCGCGACCGT GCAGGGTGTC CTCAAGCAGC CGGACGGCAC GCCTGGCCTC GTTCTGTCGA ACGGCAAAAC GGTTGGCCTG TCGACGGTCG CCGCCATTAT CTAA
|
Protein sequence | MTTSTTIGNN GATVSQTLLD TMNGAKSASS SSSSSSATSG SDLQNTFLQL LIAQMKNQDP TSPMDSSQMT SQLAQINTVT GIGQLNSSLT SLASQLTTNQ QTQAANLINS TVLAPGDSFS VSSGKATGFG VTLASDATDV QVTVKNSAGQ IVNTIDLGKQ SAGTIPVGWT PVDKSGNALP DGTYTFTAAS TTANGTGAPT TLSAATVQGV LKQPDGTPGL VLSNGKTVGL STVAAII
|
| |