Gene Bphy_2931 details

Gene Information

• Locus tag: Bphy_2931
• Symbol: fliF
• ID: 6244413
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phymatum STM815
• Kingdom: Bacteria
• Replicon accession: NC_010622
• Strand: +
• Start bp: 3286802
• End bp: 3288583
• Gene Length: 1782 bp
• Protein Length: 593 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642594735
• Product: flagellar MS-ring protein
• Protein accession: YP_001859148
• Protein GI: 186477678
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein
• TIGRFAM ID: [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 40
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATTCGT CAGCCAACTC TTTAATGACC CCCGACGCCC GCATGGGCCT CGCCGGCGCG 
CAGCCGGGCG CAGCGGGAGC CGGCCAGGGC GCCGCGGGCC TGGACCTCGG CGGCGCGGGC 
AGCGGCCTTG CCTCGCGCTT TCCGGGGCTT CCCACGTCGT TGACGCAGAT GCGCGGCAAT 
CCTCGCGCGC CGCTCATCTT CGCCGTCGCG GTGCTGATCG CCGTGGTCGC GGGTCTGGTT 
CTCTGGTCGC GTGCGCCCGA CTACAAGGTG CTGTACAGCA ACGTCTCCGA TCAGGACGGC 
GGCGCAATCG TTGCCGCGCT CCAGCAGGCG AACGTGCCGT ACAAGTTTTC CGAAGCGGGC 
GGCGCCATCC TGATCCCCGC TGACCAGGTG CACGAAATGC GTCTGCGCCT CGCGTCGCAG 
GGTCTGCCCA AGAGCGGCTC GGTCGGCTTC GAACTGATGG ACAACCAGAA GTTCGGCATC 
AGCCAGTTCG CCGAGCAGAT CAACTATCAG CGCGCGCTGG AAGGCGAACT GCAGCGCACG 
ATCGAATCCA TCTCGACGGT GAAGACGGCG CGCGTCCATC TGGCGATTCC GAAGCCCACG 
GTGTTCGTGC GCGACCGCGA AGCGCCGTCG GCGTCCGTGC TCGTCAATCT GTATCCGGGC 
CGCATGCTCG ACGAAGGCCA GGTCGTGGCC ATCACGCATA TGGTCGCGTC CGCCGTGCCC 
GACATGTCCG TACGCGGCGT GACGATCGTC GACCAGGACG GCAACCTCCT CACGCAGGCG 
GGCGCCAATG GCGCCGGGCT CGATGCGACG CAACTCAAGT ATCGGCAGCA GATCGAGCGC 
AACACGCAGC AGCGCATCGA CGCGATCCTC GGACCGATGT TCGGGACAGG CAACGCGCAT 
TCGTCGGTGA GCGCGGACAT CGACTTCTCC CGGCAAGAGC TGACCTCGGA GAAATATGCG 
CCGAACAACG ACCCGCAGCA GGCGGCCATT CGCAGCCAGC AGACCAGCAC GGCCACCGAA 
ATGTCGCAAA GCGGCGCCTC GGGCGTGCCG GGCGCGCTGT CGAACCAGCC GCCGCAGCCG 
GCCTCGGCGC CCATCACGGC GAGCGCGAAC GGCGCAAGCG GCGTGACGAC TACACCGATC 
AGCGACCATA AGGACTCGAC CACCAACTAC GAGTTGAGCA AGACCGTGAG CCACACGGAA 
GCGGCCGTTG GCGGCATCAA GCGCCTGTCG GTAGCCGTGG TGGTGAACTA CATGCGCGTC 
TTCGATGCGA AGGGCCACGC GACCATGCAG CCCATTTCCG CCGACAAGCT CGCGCAGGTC 
GATCAGCTGG TCAAGGAAGC GATGGGCTAC GACCAGGCGC GCGGCGACAC GGTCAAGGTG 
ATCAGCAGCG CGTTCCAGCA GATCGCAGAT CCGGATGCCG ACCTGCCGTG GTGGCGCACG 
AAGGACATGA TCGCGATGTA CAAGCAGATC GCGACCTACC TGGGCATCGG CCTCGTCGCA 
CTGTTCCTGT ACTTCGTGAT GGTGAAGCCG GCGCTGCGCC GTGCGTTCCC GCCGCCGCCC 
GAGGCCGTGG CCGCGCTGCC GTCGCCCGAC GAACCCGTGC TCGACGGCCT GCCGACCGCG 
GCAGCCGTGG CAGCCGAAGA GGATGTCGAG GGCAGCCTCG TCGCACTCGA GAGCGACAAG 
GCCAAATATG AGCGGAACCT CGAATATGCG CGTCAGATCG CGCGTCAGGA TCCGAAGATC 
GTTGCAACCG TCGTGAAGAG CTGGGTGTCC GATGAGCACT GA 

 

Protein sequence

MDSSANSLMT PDARMGLAGA QPGAAGAGQG AAGLDLGGAG SGLASRFPGL PTSLTQMRGN 
PRAPLIFAVA VLIAVVAGLV LWSRAPDYKV LYSNVSDQDG GAIVAALQQA NVPYKFSEAG 
GAILIPADQV HEMRLRLASQ GLPKSGSVGF ELMDNQKFGI SQFAEQINYQ RALEGELQRT 
IESISTVKTA RVHLAIPKPT VFVRDREAPS ASVLVNLYPG RMLDEGQVVA ITHMVASAVP 
DMSVRGVTIV DQDGNLLTQA GANGAGLDAT QLKYRQQIER NTQQRIDAIL GPMFGTGNAH 
SSVSADIDFS RQELTSEKYA PNNDPQQAAI RSQQTSTATE MSQSGASGVP GALSNQPPQP 
ASAPITASAN GASGVTTTPI SDHKDSTTNY ELSKTVSHTE AAVGGIKRLS VAVVVNYMRV 
FDAKGHATMQ PISADKLAQV DQLVKEAMGY DQARGDTVKV ISSAFQQIAD PDADLPWWRT 
KDMIAMYKQI ATYLGIGLVA LFLYFVMVKP ALRRAFPPPP EAVAALPSPD EPVLDGLPTA 
AAVAAEEDVE GSLVALESDK AKYERNLEYA RQIARQDPKI VATVVKSWVS DEH