| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2848 |
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| Symbol | rpoB |
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| ID | 6244331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3192571 |
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| End bp | 3196677 |
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| Gene Length | 4107 bp |
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| Protein Length | 1368 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642594644 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001859066 |
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| Protein GI | 186477596 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATATT CCTTCACCGA GAAGAAGCGT ATTCGCAAGA GTTTCGCGAA GCGCCCCATC
GTTCACCAAG TACCTTTCCT GCTGGCTACC CAGCTTGAAT CATTCAGCAC GTTTCTGCAA
GCAGAAGTGC CAACGGCGCA GCGCAAACCG GAAGGTCTGC AGGCTGCGTT CACATCGGTT
TTTCCCATTG TTTCGCATAA CGGCTTCGCT CGTCTCGAGT TCGTCAGCTA CATGCTGTCG
CCGCCGGCAT TCAATATCAA GGAATGTCAG CAGCGCGGCC TGACTTACTG CTCGGCGCTG
CGTGCCAAGG TGCGTCTCGT TCTGCTCGAC AAGGAATCGC CGAGCAAGCC CGTCGTCAAG
GAAGTGAAGG AGCAGGAAGT GTACATGGGC GAAATTCCGC TCATGACGCC GACCGGCTCG
TTCGTCATCA ACGGCACGGA ACGTGTGATC GTGTCGCAGC TGCACCGTTC GCCTGGCGTG
TTCTTCGAGC ATGACAAGGG CAAGACGCAC AGCTCCGGCA AGCTGCTGTT TTCCGCACGT
ATCATTCCTT ACCGCGGCTC GTGGCTCGAC TTCGAATTCG ACCCGAAGGA CGTGCTGTAC
TTCCGCGTCG ACCGTCGTCG CAAGATGCCC GTCACGATCC TGCTGAAGGC AATCGGCCTG
ACGCCGGAAC AGATCCTCGC GAACTTCTTC GTGTTCGACA ACTTCACGCT GATGCCGGAG
GGCGCGCAGA TGGAGTTTGT GCCGGAGCGT CTGCGTGGTG AAGTCGCGCG CTTCGACATC
ACGGACCGCG ATGGCAAGGT CATCGTCCAG AAGGACAAGC GTATCAACGC GAAGCACATT
CGCGACCTCG AAAACGCGAA GACGAAATAC ATTTCGGTTC CCGAAGACTA TCTGCTCGGC
CGTGTGCTCG CGAAGAATGT CGTCGACGGC GATACGGGCG AAGTGATCGC GAACGCGAAC
GACGAAGTCA CGGAAAGCGT GCTCGACAAG CTGCGCGAAG CGAAGATCAA GGACATCCAG
ACGCTCTACA CGAACGATCT GGATCAGGGT CCGTACATTT CGTCGACGCT GCGTATCGAC
GAAACGGCCG ACAAAATGGC CGCTCGCATT GCGATCTACC GCATGATGCG CCCGGGCGAG
CCGCCGACGG AAGAAGCCGT CGAGGCGCTG TTCAACCGTC TGTTCTACAG TGAAGAAGCC
TACGACCTGT CGAAGGTGGG TCGTATGAAG TTCAACCGCC GCGTTGGCCG CGATGAAATC
GTGGGCCCGA TGACGCTGCA GGACGACGAC ATCCTCGCGA CGATCAAGAT CCTGGTCGAG
CTGCGTAACG GCAAGGGCGA AGTGGACGAC ATCGACCACC TCGGCAACCG TCGTGTGCGC
TGCGTCGGCG AACTGGCGGA GAACCAGTTC CGCGCCGGTC TCGTGCGTGT CGAGCGCGCT
GTGAAGGAAC GCCTCGGCCA GGCCGAAAGC GAAAACCTCA TGCCGCACGA TCTGATCAAT
TCGAAGCCGA TTTCATCGGC GATTCGCGAG TTCTTCGGTT CGTCGCAGCT GTCGCAGTTC
ATGGACCAGA CCAACCCGCT GTCGGAAATC ACCCACAAGC GCCGCGTGTC GGCACTTGGC
CCGGGCGGTC TGACGCGCGA GCGCGCTGGC TTTGAAGTCC GCGACGTGCA CCCGACGCAC
TATGGCCGTG TGTGTCCGAT CGAAACGCCG GAAGGTCCGA ACATCGGTCT GATCAACTCG
CTGGCACTGT ACGCGCACCT GAACGAATAC GGCTTCCTCG AAACGCCGTA TCGCAAGGTG
ACGGACGGCA AGGTCACGGA CCAGATCGAC TATCTGTCGG CAATCGAAGA AGGCCGCTAC
GTGATCGCTC AGGCGAACGC CGCTGTGGCA GAAGACGGCA CGCTGACCGA CGAACTCGTG
TCTTCGCGTG AAGCGGGCGA AACGTTGATG GTGACGCCAG ACCGCATCCA GTACATGGAC
GTGGCGCCGT CGCAGATCGT GTCGGTGGCG GCATCGCTGA TTCCGTTCCT CGAGCACGAT
GACGCGAACC GTGCACTGAT GGGCTCGAAC ATGCAGCGTC AGGCTGTGCC GTGTCTGCGT
CCGGAAAAGC CGGTTGTCGG TACGGGTATC GAGCGTACGG TGGCGGTGGA CTCTGGCACG
ACCGTGCAGG CACTGCGCGG CGGTGTGGTC GATTACGTCG ACGCTGGCCG TATCGTGATT
CGTGTGAACG ACGACGAAGC GGTTGCCGGT GATGTCGGTG TCGACATCTA CAACCTGATC
AAGTACACGC GTTCGAACCA GAACACGAAC ATCAACCAGC GTCCGATCGC GAAGGTCGGC
GACAAGGTTG CGCGCGGCGA CGTGCTGGCT GACGGCGCTT CGACTGACCT CGGCGAACTG
GCGCTTGGCC AGAACATGCT GGTCGCGTTC ATGCCGTGGA ACGGCTACAA CTTCGAAGAC
TCGATCCTGA TCTCGGAAAA GGTCGTTGCG GACGATCGCT ACACGTCGAT CCACATCGAA
GAACTGAACG TCGTGGCTCG CGACACGAAG CTCGGACCGG AAGAAATCAC GCGCGACATT
TCGAATCTGG CTGAAGTGCA GCTTGGCCGT CTCGACGAGT CGGGCATCGT GTACATCGGC
GCGGAAGTCG AAGCGGGCGA CGTGCTGGTC GGCAAGGTCA CGCCGAAGGG CGAAACCCAG
CTGACGCCGG AAGAAAAGCT GCTGCGCGCG ATTTTCGGCG AGAAGGCATC GGACGTGAAG
GACACGTCGC TGCGCGTGCC GTCGGGCATG AGCGGCACGG TCATCGACGT GCAGGTGTTC
ACGCGTGAAG GCATCCAGCG CGACAAGCGT GCGCAACAGA TCATCGACGA CGAACTGAAG
CGCTATCGCC TCGACCTGAA CGACCAGCTG CGCATCGTGG AAGGCGACGC GTTCCAGCGT
CTCGCACGCA TGCTCGAAGG CAAGGTCGCG AACGGCGGTC CGAAGAAGCT GGCAAAGGGC
ACGAAGATCG AACGCGCTTA CCTGGAAGAT CTCGATCACT ACCACTGGTT CGACATCCGC
CTCGCGGACG AAGAAGCAGC GGCGCAGCTC GAAGCGATCA AGGATTCGAT CGAACAGAAG
CGTCACCAGT TCGACCTCGC GTTCGAAGAG AAGCGCAAGA AGCTCACGCA AGGCGACGAA
CTGCCGCCGG GCGTGCTGAA GATGGTCAAG GTGTACCTGG CAGTCAAGCG CCGCCTGCAG
CCTGGCGACA AGATGGCAGG TCGTCACGGT AACAAGGGTG TCGTGTCGAA GATCGTTCCG
ATCGAAGACA TGCCGTACAT GGCCGATGGC CGTCCCGCAG ACGTCGTGCT GAACCCGCTC
GGCGTTCCGT CGCGGATGAA CGTGGGTCAG GTTCTCGAAG TTCATCTGGG TTGGGCCGCG
AAGGGTCTGG GCTGGCGTAT CGGCGAAATG CTGCAGCGTC AGGCCAGGAT CGAGGAAGTT
CGCGCGTTCC TGACCAAGAT TTACAACGAG TCGGGCCGCG CGGAAGAGCT GGAAAGCTTC
TCCGACGACG AGATCCTCGA ACTGGCGAAG AACCTGCGCG AAGGCGTGCC GTTCGCAACG
CCGGTGTTCG ACGGTGCGAC GGAAGAGGAA ATGTCCAGCA TGCTGGATCT CGCCTTCCCG
GACGACATCG CGCAGAACCT CGGCATGACG AAGTCGAAGA ACCAGGTGCG TCTGTATGAC
GGCCGCACGG GTGAAGCCTT CGAACGTACG GTGACGGTCG GCTACATGCA CTACCTGAAG
CTGCACCACC TGGTCGACGA CAAGATGCAC GCGCGTTCGA CGGGTCCGTA CTCGCTGGTC
ACGCAGCAGC CGCTGGGTGG TAAGGCGCAG TTCGGTGGTC AGCGCTTCGG TGAAATGGAA
GTGTGGGCGC TCGAAGCGTA CGGCGCATCG TACGTGCTGC AGGAAATGTT GACGGTCAAG
TCGGACGACG TGACAGGCCG GACCAAGGTT TACGAGAACC TGGTCAAGGG CGATCACGTC
ATCGACGCGG GCATGCCGGA ATCCTTCAAC GTGCTGGTGA AGGAAATCCG CTCGCTCGGT
ATCGACATCG ACCTCGACCG CAACTAA
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| Protein sequence | MQYSFTEKKR IRKSFAKRPI VHQVPFLLAT QLESFSTFLQ AEVPTAQRKP EGLQAAFTSV
FPIVSHNGFA RLEFVSYMLS PPAFNIKECQ QRGLTYCSAL RAKVRLVLLD KESPSKPVVK
EVKEQEVYMG EIPLMTPTGS FVINGTERVI VSQLHRSPGV FFEHDKGKTH SSGKLLFSAR
IIPYRGSWLD FEFDPKDVLY FRVDRRRKMP VTILLKAIGL TPEQILANFF VFDNFTLMPE
GAQMEFVPER LRGEVARFDI TDRDGKVIVQ KDKRINAKHI RDLENAKTKY ISVPEDYLLG
RVLAKNVVDG DTGEVIANAN DEVTESVLDK LREAKIKDIQ TLYTNDLDQG PYISSTLRID
ETADKMAARI AIYRMMRPGE PPTEEAVEAL FNRLFYSEEA YDLSKVGRMK FNRRVGRDEI
VGPMTLQDDD ILATIKILVE LRNGKGEVDD IDHLGNRRVR CVGELAENQF RAGLVRVERA
VKERLGQAES ENLMPHDLIN SKPISSAIRE FFGSSQLSQF MDQTNPLSEI THKRRVSALG
PGGLTRERAG FEVRDVHPTH YGRVCPIETP EGPNIGLINS LALYAHLNEY GFLETPYRKV
TDGKVTDQID YLSAIEEGRY VIAQANAAVA EDGTLTDELV SSREAGETLM VTPDRIQYMD
VAPSQIVSVA ASLIPFLEHD DANRALMGSN MQRQAVPCLR PEKPVVGTGI ERTVAVDSGT
TVQALRGGVV DYVDAGRIVI RVNDDEAVAG DVGVDIYNLI KYTRSNQNTN INQRPIAKVG
DKVARGDVLA DGASTDLGEL ALGQNMLVAF MPWNGYNFED SILISEKVVA DDRYTSIHIE
ELNVVARDTK LGPEEITRDI SNLAEVQLGR LDESGIVYIG AEVEAGDVLV GKVTPKGETQ
LTPEEKLLRA IFGEKASDVK DTSLRVPSGM SGTVIDVQVF TREGIQRDKR AQQIIDDELK
RYRLDLNDQL RIVEGDAFQR LARMLEGKVA NGGPKKLAKG TKIERAYLED LDHYHWFDIR
LADEEAAAQL EAIKDSIEQK RHQFDLAFEE KRKKLTQGDE LPPGVLKMVK VYLAVKRRLQ
PGDKMAGRHG NKGVVSKIVP IEDMPYMADG RPADVVLNPL GVPSRMNVGQ VLEVHLGWAA
KGLGWRIGEM LQRQARIEEV RAFLTKIYNE SGRAEELESF SDDEILELAK NLREGVPFAT
PVFDGATEEE MSSMLDLAFP DDIAQNLGMT KSKNQVRLYD GRTGEAFERT VTVGYMHYLK
LHHLVDDKMH ARSTGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAS YVLQEMLTVK
SDDVTGRTKV YENLVKGDHV IDAGMPESFN VLVKEIRSLG IDIDLDRN
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