| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2840 |
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| Symbol | rplC |
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| ID | 6244323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3180242 |
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| End bp | 3180901 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642594636 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001859058 |
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| Protein GI | 186477588 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000111519 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.199419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCTGAAGGG
GATTCGATTC CCGTCACCGT GCTGGACGTG TCCGACAACC GCGTGACGCA GATCAAGACT
GTTGAAACCG ACGGCTACAC GGCCGTTCAG GTTGCCTTCG GTACGCGCCG TGCATCGCGC
GTGACGAAGC CGCTGGCAGG TCATCTCGCC AAAGCCGGTG TTCAAGCTGG TGAAATCCTC
AAGGAATTCC AAATCGACGC CGCCAAGGCT GCCGAGCTGT CCAGTGGCGC CGTGATCGGT
GTAGATCTCT TCGAAGTGGG CCAGAAAGTC GACGTGCAGG GCACCTCGAT CGGTAAGGGC
TACGCCGGTA CCATCAAGCG CTACAACTTC AGCTCGGGTC GCGCATCGCA CGGTAACTCG
CGTTCGCACA ACGTGCCGGG TTCGATCGGT ATGGCGCAGG ATCCGGGTCG TGTGTTCCCG
GGTAAGCGCA TGACGGGTCA CATGGGTGAC GAGACGGTCA CTGTGCAGAA TCTCGAAATC
GCACGTATCG ACGCAGATCG CAAGCTGCTG CTGGTCAAGG GTGCTGTTCC GGGCGCGAAG
GGCGGCAAGG TTTTCGTGAC GCCGGCTGTC AAGACGCGCG CCGTGAAAGG AGCGAAATAA
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| Protein sequence | MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGTRRASR
VTKPLAGHLA KAGVQAGEIL KEFQIDAAKA AELSSGAVIG VDLFEVGQKV DVQGTSIGKG
YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD ETVTVQNLEI
ARIDADRKLL LVKGAVPGAK GGKVFVTPAV KTRAVKGAK
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