Gene Bphy_2840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2840 
SymbolrplC 
ID6244323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3180242 
End bp3180901 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content60% 
IMG OID642594636 
Product50S ribosomal protein L3 
Protein accessionYP_001859058 
Protein GI186477588 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.11519e-07 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.199419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCTGAAGGG 
GATTCGATTC CCGTCACCGT GCTGGACGTG TCCGACAACC GCGTGACGCA GATCAAGACT
GTTGAAACCG ACGGCTACAC GGCCGTTCAG GTTGCCTTCG GTACGCGCCG TGCATCGCGC
GTGACGAAGC CGCTGGCAGG TCATCTCGCC AAAGCCGGTG TTCAAGCTGG TGAAATCCTC
AAGGAATTCC AAATCGACGC CGCCAAGGCT GCCGAGCTGT CCAGTGGCGC CGTGATCGGT
GTAGATCTCT TCGAAGTGGG CCAGAAAGTC GACGTGCAGG GCACCTCGAT CGGTAAGGGC
TACGCCGGTA CCATCAAGCG CTACAACTTC AGCTCGGGTC GCGCATCGCA CGGTAACTCG
CGTTCGCACA ACGTGCCGGG TTCGATCGGT ATGGCGCAGG ATCCGGGTCG TGTGTTCCCG
GGTAAGCGCA TGACGGGTCA CATGGGTGAC GAGACGGTCA CTGTGCAGAA TCTCGAAATC
GCACGTATCG ACGCAGATCG CAAGCTGCTG CTGGTCAAGG GTGCTGTTCC GGGCGCGAAG
GGCGGCAAGG TTTTCGTGAC GCCGGCTGTC AAGACGCGCG CCGTGAAAGG AGCGAAATAA
 
Protein sequence
MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGTRRASR 
VTKPLAGHLA KAGVQAGEIL KEFQIDAAKA AELSSGAVIG VDLFEVGQKV DVQGTSIGKG
YAGTIKRYNF SSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD ETVTVQNLEI
ARIDADRKLL LVKGAVPGAK GGKVFVTPAV KTRAVKGAK