| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2678 |
|---|
| Symbol | murE |
|---|
| ID | 6244161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3021664 |
|---|
| End bp | 3023202 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642594468 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
|---|
| Protein accession | YP_001858896 |
|---|
| Protein GI | 186477426 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGCGC TGCGTTCTTC TCATCCGGCG CAACAGCAGA TTGCTGAAGC GCTTGCCTGG
CTGCGCGCGC ATGCGCAGCC AGGCGCACAT TTGCACGCCG ATAGCCGCAA GATCGCGCCG
GGCGACGTGT TTCTCGCGTA CGCCGTCGAT GGCGCGGACA ATCGCCCGTT CATCGCCAGC
GCGATCGAGC GCGGTGCAGC TGCCGTACTC GTGCAAGCGG ATGGCTTCGC AGGCGATATC
GATCCCGCCC TGATGGTCGC CGTGCCGCGC CTGAATGAAC TTACGGGCAC GATCGCGAGC
GCATGGTACG GCGACCCGAG TGACGCGATG CGCGTGATCG GCGTGACGGG CACGAACGGC
AAGACGTCCT GCACGAACTG GATTTCGGCG GCACTGACGG CGCTCGGCCA GCCGTGCGCG
ATCATCGGCA CGCTCGGCAG CGGCATGCCG GGCCAACTGG TGCACACCGG CTTCACGACG
CCGGACGCGC CGCAACTGCA GCGCAGTCTC GAGCAACTCC GCGCAGCAGG CGCGAAGGCC
GTCGCGATGG AAGTGTCGTC GCACGCGCTG CATCAGGGCC GCGTGAACGG CACTGCGTTC
AGTGTCGGCG TATTCACGAA TCTCACGCAG GATCACCTCG ACTATCACGG CACGTTCGCT
GCCTATGAAG CGGCGAAAGC GCGCCTGTTT TCATGGCCGG AGCTGAAGGC GGCCGTCATC
AACGCGGACG ACGAAGCCGG CCGGCGCATG ATCGCGAGCA CCAACGGTCA CGCGAAGACG
ATCGCCTACT CGCTGCAGCC GCGCGCCGAC GTGCAGGCCG ATGCATCGAT CGTCGCATCG
AACGTGCGCG CGACGACGAC GGGGACCGCA TTTCACATCG CGTCGGACTG GGGCAATTCG
GACATCGAGG TGAACACGCT TGGCGCGTTT AACGTGAGCA ATCTGCTCGG CGTGCTCGGT
GCGCTGCTCG CGTCCGACGT ACCGTTCGAC GCCGCCGTCG CACAGATCGC GAAGCTCGAA
TCGGTGAATG GCCGGATGGA ACGCCTCGGC GGCCGTGTGC AGAACGACGA GCCGCTTGTC
GTGATCGACT ACGCGCACAC GCCCGACGCG CTTGAACAAA CGCTGACCGC GCTGCGCCCG
ATCGCGGACG CGCGGGGCGG CAAGCTGATC TGCATGTTCG GCTGCGGCGG CGATCGCGAC
GCGACCAAGC GCCCGCTGAT GGGCGAAATC GCCGAGCGTT GCGCCGACGG CGTCGTCGTG
ACGAGCGACA ACCCGCGCAG CGAAGATCCG CACAAAATCA TCGACCAGAT CGCCGCGGGC
ATGAAAGACG CGTCGAAGGC GCGCCGTATC GAAGACCGCG CGAGCGCCAT CCTGCAGGCA
GTGCGCTGCG CGGCGCGTGA AGACGTCGTC GTGCTGGCGG GCAAAGGTCA CGAATCGACG
CAGGAAATCA TGGGCAAGAA GCGCGCCTTC TCGGATCAGG ATCATGCACG GCTCGCACTC
GCGGCCCGCG CCACGCATGC ACGCGGAGGC GGCGAATGA
|
|---|
| Protein sequence | MSALRSSHPA QQQIAEALAW LRAHAQPGAH LHADSRKIAP GDVFLAYAVD GADNRPFIAS
AIERGAAAVL VQADGFAGDI DPALMVAVPR LNELTGTIAS AWYGDPSDAM RVIGVTGTNG
KTSCTNWISA ALTALGQPCA IIGTLGSGMP GQLVHTGFTT PDAPQLQRSL EQLRAAGAKA
VAMEVSSHAL HQGRVNGTAF SVGVFTNLTQ DHLDYHGTFA AYEAAKARLF SWPELKAAVI
NADDEAGRRM IASTNGHAKT IAYSLQPRAD VQADASIVAS NVRATTTGTA FHIASDWGNS
DIEVNTLGAF NVSNLLGVLG ALLASDVPFD AAVAQIAKLE SVNGRMERLG GRVQNDEPLV
VIDYAHTPDA LEQTLTALRP IADARGGKLI CMFGCGGDRD ATKRPLMGEI AERCADGVVV
TSDNPRSEDP HKIIDQIAAG MKDASKARRI EDRASAILQA VRCAAREDVV VLAGKGHEST
QEIMGKKRAF SDQDHARLAL AARATHARGG GE
|
|---|
| |