Gene Bphy_2625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2625 
Symbol 
ID6244108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2964405 
End bp2965814 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content66% 
IMG OID642594414 
ProductUDP-N-acetylmuramate 
Protein accessionYP_001858843 
Protein GI186477373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATTC ACATCCTCGG CATCTGCGGC ACATTCATGG GTGGTCTCGC GGTTCTCGCG 
CGCAACGCCG GTCACACGGT GACGGGCTGC GACGCCGGCG TCTATCCGCC GATGAGCACG
CAGCTCGAGG CGCAAGGCAT CAAGCTGATC GAAGGCTGGG GCGTCGAGCA ACTCGATCTG
AAGCCGGACC TGTTCGTGGT CGGCAACGTC GTGACGCGCG GCAATCCGCT GATGGAAGAG
ATCCTCAATC GAGGACTGCC GTACACGTCC GGCCCGCAGT GGCTCGGCGA GCATGTGCTT
AACGGCAAAT GGGTGCTGGC CGTGGCAGGC ACGCACGGCA AGACCACGAC GACGTCGATG
CTGACGTGGC TGCTCGAAGA CGCGGGCATG AACCCAGGCT TTCTGATCGG CGGCGTGCCG
CTGAACTTCG GTGTGTCGGC GCGGCTGACG GATTCCAGCT TTTTCGTGAT CGAAGCCGAC
GAATACGACA CCGCGTTCTT CGACAAGCGC TCGAAATTCG TCCACTACCG GCCGCGCACC
GCCGTTCTGA ACAACCTCGA ATTCGATCAC GCGGATATCT TCCCCGATCT CGCTGCGATC
GAAACGCAAT TCCACCATCT CGTGCGCACC GTGCCGGGCA TTGGCCGCGT CGTGTCGAAC
GGCCGTGAAG TTGCACTGGA CCGCGTGCTC GCGCGCGGCT GCTGGAGCGA AGTGGAGCGC
TTCGGCGTCG AGGGCGGCTG GCAGGCGTTG CCCGCTGAAG ACGGCGTCGC CGTCGACGAG
CGCTTTGCCG TCTATCACAA CGGCGAGCGC GTCGGTGTGG TCGACTGGCA GGTTCAGGGC
GAGCACAACC GGATGAACGC GATCGCCGCG ATCGCCGCCG CGCGCCACAT CGGCGTGCCG
CCCGCGCAGG CAGCGAAGTC GCTCTCGACG TTCCGCAACG TGAAGCGCCG GATGGAAGTG
CGCGGCAGCG TCGACGGCGT GACCGTCTAC GACGATTTCG CGCACCATCC GACGGCGATC
CAGACGACGG TCGCGGGTCT GCGCACGCGT ATCGGCCGTA CGAATACACG CATTCTCGCC
GTGCTGGAGC CGCGCTCGAA CACAATGAAG CTCGGCGTGA TGAAAGCGCA ACTCCCGGCG
AGCCTGGCCG ACGCAGATCT CGTGTTCGGG TACGGCGCAC CTTCGGGCAA GGACGCGCTC
GGCTGGAACC TCGCCGAAGC TCTCGCGCCG ATGGGCGACA AGGCGCAGGC GTTCAATGAA
ATCGACTCGC TCGTCAAGGC AGTCGTCGCG GCCGCGCAGC CGGGCGACCA GGTGCTGGTG
ATGAGCAACG GCGGTTTCGG CGGCGTGCAT CAGAAGCTGC TCGATGCGCT GTCGGCACGG
CCGACGGAGC AGGCGCGGGG CGTCGCGTGA
 
Protein sequence
MHIHILGICG TFMGGLAVLA RNAGHTVTGC DAGVYPPMST QLEAQGIKLI EGWGVEQLDL 
KPDLFVVGNV VTRGNPLMEE ILNRGLPYTS GPQWLGEHVL NGKWVLAVAG THGKTTTTSM
LTWLLEDAGM NPGFLIGGVP LNFGVSARLT DSSFFVIEAD EYDTAFFDKR SKFVHYRPRT
AVLNNLEFDH ADIFPDLAAI ETQFHHLVRT VPGIGRVVSN GREVALDRVL ARGCWSEVER
FGVEGGWQAL PAEDGVAVDE RFAVYHNGER VGVVDWQVQG EHNRMNAIAA IAAARHIGVP
PAQAAKSLST FRNVKRRMEV RGSVDGVTVY DDFAHHPTAI QTTVAGLRTR IGRTNTRILA
VLEPRSNTMK LGVMKAQLPA SLADADLVFG YGAPSGKDAL GWNLAEALAP MGDKAQAFNE
IDSLVKAVVA AAQPGDQVLV MSNGGFGGVH QKLLDALSAR PTEQARGVA