| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2588 |
|---|
| Symbol | leuS |
|---|
| ID | 6244071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2924891 |
|---|
| End bp | 2927485 |
|---|
| Gene Length | 2595 bp |
|---|
| Protein Length | 864 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594377 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_001858806 |
|---|
| Protein GI | 186477336 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.224639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00000000206331 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACGAAA AATACGTTCC CTCCGACGTC GAATCCGCCG CGCAAGGACA ATGGCGCGCC
ACCGACGCGT ACAAAACGAC GGAAACGGCC GACAAGCCCA AGTTCTATTG CGTTTCGATG
CTGCCGTATC CGTCGGGCAA GCTGCACATG GGGCACGTAC GCAATTACAC GATCAATGAC
GTGATGTACC GCTATCTGCG GATGAACGGC TACAACACGC TGATGCCGAT GGGCTGGGAC
GCGTTCGGCA TGCCCGCCGA AAACGCCGCG ATGGCCAACG GCGTGCCGCC CGCGAAGTGG
ACGTACGACA ACATCGCGTA CATGAAGAAG CAGATGCAGT CGATGGGTCT CGCCATCGAC
TGGTCGCGCG AAGTCGCCAC CTGCAGCCCG GACTACTACA AGTGGAACCA GTGGATCTTC
CTGAAGATGC TGGAAAAGGG CATCGCGTAC AAGAAGACGG GCACCGTGAA CTGGGACCCC
GTGGATCAGA CCGTGCTCGC GAACGAGCAG GTGATCGACG GCCGCGGCTG GCGCTCGGGC
GCGCTCGTCG AGAAGCGCGA AATCCCGATG TACTACATGC GCATCACGCA GTACGCAGAT
GAGCTGCTGA ACGATCTCGA CGGCCTCGGC TGGCCCGAGC GCGTAAAGGT GATGCAGCAG
AACTGGATCG GCAAGAGCTT CGGCGTGAAC TTCGGCTTCC CGTACGAACT GGACGGCGAG
CAAAAGCTGC TGCGCGTGTT CACGACGCGC GCCGACACGA TCATGGGCGT GACCTTCTGC
GCGGTCGCCG CCGAGCACCC GCTCGCGACG CGCCTCGCGC AAGGGCGTCC CGACCTGCAG
TCGTTCATCG ACGAATGCAA GCACGGCGGC GTCGCCGAAG CCGACATGGC GACGATGGAA
AAGAAGGGCA TGGCCACAGG CTTTTTTGTC ACGCATCCGC TGACACAGGA GAAGGTCGAG
GTCTGGATCG GCAACTACGT GCTGATGAGC TACGGCGAAG GTGCCGTGAT GGGCGTGCCC
GCGCACGACG AGCGAGACTT CGCGTTCGTG AAGAAGTACG GCATTCCCGT GAAGCAGGTC
GTTGCCGTTG AAGGCGAGAC GTTCTCGACG GACGCCTGGC AGGAATCGTA CGGCGACAAG
GAAAACGGCG TCCTGATCAA TAGCGGCAAG TACGACGGCC TCAAGTACGG CGAAGCCGTC
GACGCGATCG CTGCCGATCT GAAAGCACTC GGCCTCGGCG AGAAGCAGGT CACGTGGCGT
CTGCGCGACT GGGGCATCTC GCGCCAGCGC TACTGGGGCA CGCCGATCCC GATTATCCAC
TGCCCGTCGT GTGGCGACGT GCCCGTGCCG GAAAAGGATC TGCCCGTCGT GCTGCCGGAA
GACCTCGTAC CGGACGGCAC GGGCAATCCC CTCGCGAAGT CGGAAGCGTT TCTGAACTGC
ACCTGCCCGA CGTGCGGCGC AGCCGCGAAG CGTGAAACCG ACACGATGGA CACGTTCGTC
GATTCGTCCT GGTACTTCTA TCGCTACGCG GCACCCGACG CGAAGACGAT GGTCGACGCG
CGCACCGATT ACTGGATGCC GATGGATCAA TACATCGGCG GCATCGAGCA CGCCATTCTT
CACCTGCTTT ACTCGCGTTT CTGGGCAAAG GTCTGCCGCG ATCTGGGCAT CGTGAAATTC
GGCGAGCCGG CCAAGAACCT GCTCACGCAG GGCATGGTGC TCAACGAAAC CTATTACCGC
GAAAACGACG CGGGCAAGAA GACCTGGTAC AACCCGGCCG ACGTCACCGT CACGCACGAC
GACAAAGGCC GCCCGGTCGG CGCGACGCTG AACGCCGACG GGCAGCCCGT CGTGCTCGGC
GGCGTCGAGA AGATGTCGAA GTCGAAGAAC AACGGCGTCG ACCCGCAGGT GCTCATCGAC
CAGTACGGCG CCGATACCGC GCGTCTGTTC ACGATGTTCG CCGCTCCGCC GGAACAGCAA
CTCGAGTGGT CGGGCGCGGG CGTCGAAGGC GCGAGCCGCT TCCTGCGCCG CGTGTGGGCG
TTCGGTCAGG CAAACGAAAC TGCGCTCACC GAGCGCGCTC CATTCGACGC CGCGAAGCTC
GCCGACACCG AGAAAACGCT GCGCCGCGAA ATCTACAGTG TGCTGAAGCA GGCCGACTTC
GACTATCAGC GTTTGCAGTA CAACACGGTC GTGTCGGCGG CGATGAAGAT GCTCAACGCG
ATAGAAGGCG CAAAGGGCGC GAGCGCCGCC GTGCTGCGCG AAACGTACGG CGTGCTGCTG
CGGGTGCTGT ACCCGGTCGT GCCGCATGTC ACGTTCCAGC TGTGGCGTGA GCTCGGCTAC
GAAGGCGAAT TCGGTTCGCT GCTCGACGCA CCGTGGCCGA AGGTCGACGA AAAAGCGCTG
GAGCAAAGCG AAATCGAACT TGTGCTGCAG GTGAACGGCA AGGTGCGCGG CGCCGTGACG
GTTGCGAAGG ACGCGTCGCG CGAAGCGATC GAAGCCGTCG CGCTCGCCCA CGAGATGTTC
GCGAAGTTCA GCGAAGGCAA GCCAGCGAAG AAGGTCATCG TCGTGCCGGG CCGTCTCGTG
AACGTCGTTG TCTGA
|
|---|
| Protein sequence | MHEKYVPSDV ESAAQGQWRA TDAYKTTETA DKPKFYCVSM LPYPSGKLHM GHVRNYTIND
VMYRYLRMNG YNTLMPMGWD AFGMPAENAA MANGVPPAKW TYDNIAYMKK QMQSMGLAID
WSREVATCSP DYYKWNQWIF LKMLEKGIAY KKTGTVNWDP VDQTVLANEQ VIDGRGWRSG
ALVEKREIPM YYMRITQYAD ELLNDLDGLG WPERVKVMQQ NWIGKSFGVN FGFPYELDGE
QKLLRVFTTR ADTIMGVTFC AVAAEHPLAT RLAQGRPDLQ SFIDECKHGG VAEADMATME
KKGMATGFFV THPLTQEKVE VWIGNYVLMS YGEGAVMGVP AHDERDFAFV KKYGIPVKQV
VAVEGETFST DAWQESYGDK ENGVLINSGK YDGLKYGEAV DAIAADLKAL GLGEKQVTWR
LRDWGISRQR YWGTPIPIIH CPSCGDVPVP EKDLPVVLPE DLVPDGTGNP LAKSEAFLNC
TCPTCGAAAK RETDTMDTFV DSSWYFYRYA APDAKTMVDA RTDYWMPMDQ YIGGIEHAIL
HLLYSRFWAK VCRDLGIVKF GEPAKNLLTQ GMVLNETYYR ENDAGKKTWY NPADVTVTHD
DKGRPVGATL NADGQPVVLG GVEKMSKSKN NGVDPQVLID QYGADTARLF TMFAAPPEQQ
LEWSGAGVEG ASRFLRRVWA FGQANETALT ERAPFDAAKL ADTEKTLRRE IYSVLKQADF
DYQRLQYNTV VSAAMKMLNA IEGAKGASAA VLRETYGVLL RVLYPVVPHV TFQLWRELGY
EGEFGSLLDA PWPKVDEKAL EQSEIELVLQ VNGKVRGAVT VAKDASREAI EAVALAHEMF
AKFSEGKPAK KVIVVPGRLV NVVV
|
|---|
| |