| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2517 |
|---|
| Symbol | |
|---|
| ID | 6244000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2835852 |
|---|
| End bp | 2836550 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642594306 |
|---|
| Product | alanine racemase domain-containing protein |
|---|
| Protein accession | YP_001858735 |
|---|
| Protein GI | 186477265 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.225473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACC TCGCCCACAA TCTCGACGCA GTGCATCAGC GCATCGCCCT CGCCGCGCGG
ATCGCGGGCC GCGATCCTGG CTCCATAGCG CTTCTTGCCG TCTCGAAGAC GTTCCCAGCC
GAAGACGTTC GCGCCGCGCA TGTCGCCGGG CAGCGTGCGT TCGGCGAAAA CTACGTGCAG
GAAGCGCTGA CCAAGATCGG AGCGCTGTCC GATCTGCGTG CCTCGCTCGC CTGGCATTTC
ATCGGGCCGC TGCAATCGAA CAAGACGCGT CCCGTCGCCG AGCATTTCGA CTGGGTACAT
TCCGTCGACC GGTTGAAGAT CGCGCAGCGT TTGTCGGAGC AGCGGCCGGA TACGGCGCCT
GCGCTCAATG TGTGCCTGCA GGTCAATATC AGCGGCGAAG CCTCGAAGAG CGGCGTTACG
CCTGAGGAAG CCCTCGACGT CGCGCGCCAG GTCGCTGCGT TGCCCAGGTT GCGTCTGCGC
GGCCTGATGG CGATTCCCGA ACCGGCAGGC GACGTCGAAC AACAGCGCGT GCCGCATCGC
GCGTTGCGCG AGCTGTTCGA CAGGTTGCGG GCACAAGGCC TGGATCTCGA CACGCTGTCG
ATGGGCATGT CCGGCGATCT CGAAGCGGCC GTGCTCGAAG GCGCGACTAT CGTACGCGTC
GGCACCGCGA TCTTCGGCGC CCGCGATTAC TCTCACTGA
|
|---|
| Protein sequence | MPDLAHNLDA VHQRIALAAR IAGRDPGSIA LLAVSKTFPA EDVRAAHVAG QRAFGENYVQ
EALTKIGALS DLRASLAWHF IGPLQSNKTR PVAEHFDWVH SVDRLKIAQR LSEQRPDTAP
ALNVCLQVNI SGEASKSGVT PEEALDVARQ VAALPRLRLR GLMAIPEPAG DVEQQRVPHR
ALRELFDRLR AQGLDLDTLS MGMSGDLEAA VLEGATIVRV GTAIFGARDY SH
|
|---|
| |