| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2356 |
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| Symbol | |
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| ID | 6243842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2643894 |
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| End bp | 2644853 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642594147 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_001858577 |
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| Protein GI | 186477107 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.10775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGAC CGCCTATCCC CGACAACGAA AGCGAGCGCG TGGAGACGCT GCGTTCGCTG
CATATCCTCG ATACACCGCC AGAAGAACGG TTCGACCGTC TGACGCGCCT CGCGCGACGC
CTGTTCGGCG TGCCCATTGC CGCCGTGACG CTGGTCGACA GCCATCGACA ATGGTTCAAG
TCGCATCCCG GCCTCGAAGC CTCCGAAACG CCGCGCGACG TGTCCTTCTG TGGTCATGCC
ATTGCCGACG ACGACCTGTT TCTCGTGAAC GACGCATCGC TCGACGTGCG CTTCGCCGAC
AATCCGCTGG TAACGGGCGA CCCGAACATC CGCTTCTATG CGGGCTATCC GCTTACCGTC
AGCAACGGCA GCCGGCTCGG CACACTGTGT CTGATCGATG TGAAGCCACG TGCGCTCGAT
GACGAAGAGC GGGTGCTGTT GCGCGATCTT GCACGCATGG CCGAGCAGGA AATCGCCGCG
GTGCAGCTCG CAACCACCGA CGAGCTGACG GGCCTGTCGA ATCGCCGTGG CTTCGAAGCG
CTCGCGCAGC ACGCGATCAA ACACTGCAAG CGTGCGCAGA AGCCTGCGTC GCTGCTGTTC
TTCGATCTGA ACGGTTTCAA GCAGATCAAC GACGTGTTTG GTCACGCGGA AGGGGACCGC
GCGTTGATTG CATTTGCAGC GGTATTGCGC ACGGCGCTGC GCGACAGCGA TGTGATCGGC
CGGCTAGGCG GCGACGAGTT CGTCGTGCTG CTGACCGATT CGGATCAGCA AGGCACGCTG
CAGACCATCG AGCGGCTCAG GCATCAGCTG GACCTGCAGA ACCAGTCGGC GCAGGCGCCT
TATCAGCTGC ATTGCAGCGT GGGCACGGCG ACATACACGC CCGACAGTCC GCGGAGCATC
GATGATCTGC TCGCGCAAGC CGACGTCGCG ATGTACGCGA ACAAGCGCGC ACAACGCTAA
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| Protein sequence | MLRPPIPDNE SERVETLRSL HILDTPPEER FDRLTRLARR LFGVPIAAVT LVDSHRQWFK
SHPGLEASET PRDVSFCGHA IADDDLFLVN DASLDVRFAD NPLVTGDPNI RFYAGYPLTV
SNGSRLGTLC LIDVKPRALD DEERVLLRDL ARMAEQEIAA VQLATTDELT GLSNRRGFEA
LAQHAIKHCK RAQKPASLLF FDLNGFKQIN DVFGHAEGDR ALIAFAAVLR TALRDSDVIG
RLGGDEFVVL LTDSDQQGTL QTIERLRHQL DLQNQSAQAP YQLHCSVGTA TYTPDSPRSI
DDLLAQADVA MYANKRAQR
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