| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2313 |
|---|
| Symbol | |
|---|
| ID | 6243799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2597585 |
|---|
| End bp | 2598937 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642594104 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001858534 |
|---|
| Protein GI | 186477064 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0239499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTG ACGATATCGC TATCGGCGTA CACCATCTCG CCAAACGCTA TCAGATCTAC
GAGACGCCGC GCGACCGGCT GAAGCAGTTC GTGCTGCCAC GCGTTCAGCG GCTGGTTGGC
GGGCAGCCGA AGCACTATTT CAGTGAGTTC TGGGCGCTCA ATGACGTGTC CTTCGAGGTG
AAGAAGGGCG AGACGGTCGG GATCATCGGT CGCAACGGGA GCGGCAAGTC CACCCTGCTG
CAGATGATCT GCGGCACCTT GAGCCCGACG CAGGGGCATG TCGAGGTGAA CGGCCGGGTG
GCTGCGTTGC TCGAACTGGG CGCGGGCTTC AACCCGGAGT TCACCGGGCG CGAGAACATC
TTCATGAACG GGACGCTGCT TGGCCTCAGC AAACAGGAGA TCGAAGCGCG CTACGACGAT
ATCGTCGCGT TCGCCGACGT CGGCATGTTC ATCGATCAGC CCGTCAAGAT GTATTCGTCC
GGGATGTACG TTCGAGTCGC GTTTGCGATT GCGGCGAGCA TGGACCCGAG CATTCTGATC
GTCGACGAGG CGCTGGCCGT CGGCGATCTC GCGTTCCAGG CCAAGTGCAT GGTCCGGCTT
CGCGAGTTGA TGGACCGCGG CACGACGGTG CTGTTTGTGA GCCATGATAT GAGCAGTGTG
CGCAATATCT GTAGCAAGGT GCTCTGGCTG AAGCAGGGGC GCGCGGTTGC GTATGGCGAT
CCGAAGGAGG TGGTCGGGGC TTACGTCAGT GAGATGAACC TCGACATCAA CCGGATTACG
ACAAAGAAGG TGTCCGAAGC CGAGCCGCAG CCGTTGCCGG GTCCGGTTGA GCAAGTCGTG
CCTCACGAGC CGGTGGCGTT CCTCGACGGC CATAGTCGCT ACGGTGACGG TCGCGCAACC
ATTCTGGACG TCACACTGAT GGATCAGGAA GGACATGGAA CGGAATTGCT CGAGTTGCAC
GAGCCGTACA AGCTGAGAGT GATCCTCAGG GCGAACACTG ACATCGAGAA CCCGGCCATT
GGCTATTCGC TGCGCGACTT CAAGGGGAAT CAGATCGTGG GGGCGATGAA CTCCAACTTT
CCCCACGTCA ACATGCCGTC GTTCGAAGCG GGTAAGACTT ATTGCGTCGA TATAACCGGG
GTCAATATGC TGGCTCAAGG TGGATATACC GTGAATGTTG GCGTCGAGAA CATCGTTCAG
CAGAACAAGG TGCATCAGTA TCTGGACGTA CTCGAGAACG CGCGGGTATT CCAGAGCACG
TTCGGCTCGC AGGCGGAAAA CATTTTCCCG GCGATGGTCT GGCAGGACGT CGACTTCGAA
ATCAGGGAAA TCAGTGCGGG CGTTGCGGCG TAA
|
|---|
| Protein sequence | MSSDDIAIGV HHLAKRYQIY ETPRDRLKQF VLPRVQRLVG GQPKHYFSEF WALNDVSFEV
KKGETVGIIG RNGSGKSTLL QMICGTLSPT QGHVEVNGRV AALLELGAGF NPEFTGRENI
FMNGTLLGLS KQEIEARYDD IVAFADVGMF IDQPVKMYSS GMYVRVAFAI AASMDPSILI
VDEALAVGDL AFQAKCMVRL RELMDRGTTV LFVSHDMSSV RNICSKVLWL KQGRAVAYGD
PKEVVGAYVS EMNLDINRIT TKKVSEAEPQ PLPGPVEQVV PHEPVAFLDG HSRYGDGRAT
ILDVTLMDQE GHGTELLELH EPYKLRVILR ANTDIENPAI GYSLRDFKGN QIVGAMNSNF
PHVNMPSFEA GKTYCVDITG VNMLAQGGYT VNVGVENIVQ QNKVHQYLDV LENARVFQST
FGSQAENIFP AMVWQDVDFE IREISAGVAA
|
|---|
| |