| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2226 |
|---|
| Symbol | |
|---|
| ID | 6243712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2498894 |
|---|
| End bp | 2500006 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594017 |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_001858447 |
|---|
| Protein GI | 186476977 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.754034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTG AACGCTCTCT CCAGCGCGAA CTGGCGTACA CGGCTGGTGC CGTGTTCATG
GTTTTGCTCA CGCTGGTTCT GACGACGATG ATGATCCGCA TCGTCGGCTT CGCGGCGTCC
GGTGAAATCG ACCCGCGCGA CGTGCTCGTC CTGATCGGCC TCACGGTCAT CGGCTATCTC
GCGATCATGC TGGTCGCGAC GCTGTTCGTG TCGATCCTGT TCGTGCTCAC CCGCTGGTAC
AAAGATTCCG AAATGGTCGT GTGGCTCGCC TCGGGCGTGA GCCTCGCGCG CTTCATCAGG
CCGATCGGCG TGTTCGCGAC GCCCATCATC ATTCTGATCG CCTTCTTCGT GTTCGTCGGC
TGGCCGTGGT CGAACCAGCA GAGCAAGCTG ATCCGCGCGC GCTTCCAGCA ACGCGACGAG
GTCTCGCTGC TCGCGCCGGG CCAGTTCCGC GAATCGGCCG CGAGCCATCG CGTGTTCTTC
ATCGAGAAGA TGTCGCCCGA TCAGGGCCAC GTCGAGAACG TGTTCGTCAC GAGCACGGAG
AACGGCAAGG TCAACGTGGT CGTGTCGAAG AACGGCCATA CGGAAACGCA CAAGAACGGC
GACCGCTTCG TGGTGCTCGA AAACGGCCGC CGCTATGACG GCGAGCCGGG CCATCCCGAC
TTCCGCATCA TGGAGTTCGA GCGCTACGGC GTGAAGATCC AGAGCCAGCC GGTGGTCAGC
ACGCCGACCA CGACGGGCAC ACCGACGCTC GACCTGTTCC GCGACCCGAC CCGCCAGAAT
CTCGCCGAAT TCGCGTGGCG CGCGGGCCTG CCCCTGATCG CGATCAATCT GATGCTGCTC
GCGATTCCCC TCGCGCACCA GAATCCGCGC CGCAGCCGCA CCATCAATCT CGTGATGGCC
GTGCTGATCT ATCTGACCTA TTCGAACCTG CTGAACGTCG TGCAGTCGTG GATCGAGCAA
GGCAAGATGT CTTTCGGCGT CGGCCTCGTG GGACTGCATA TTCTCGTTGC GCTGATCGTC
GTGTTCATTT TCTGGCTGCG GGTGCGCAAC CGGCCGCTCT TCACGCGAGC CATGTTCAGC
CGCCCGGCTG ACCGCTCGAC GCAGGGGGCG TGA
|
|---|
| Protein sequence | MIFERSLQRE LAYTAGAVFM VLLTLVLTTM MIRIVGFAAS GEIDPRDVLV LIGLTVIGYL
AIMLVATLFV SILFVLTRWY KDSEMVVWLA SGVSLARFIR PIGVFATPII ILIAFFVFVG
WPWSNQQSKL IRARFQQRDE VSLLAPGQFR ESAASHRVFF IEKMSPDQGH VENVFVTSTE
NGKVNVVVSK NGHTETHKNG DRFVVLENGR RYDGEPGHPD FRIMEFERYG VKIQSQPVVS
TPTTTGTPTL DLFRDPTRQN LAEFAWRAGL PLIAINLMLL AIPLAHQNPR RSRTINLVMA
VLIYLTYSNL LNVVQSWIEQ GKMSFGVGLV GLHILVALIV VFIFWLRVRN RPLFTRAMFS
RPADRSTQGA
|
|---|
| |