| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2206 |
|---|
| Symbol | |
|---|
| ID | 6243692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 2480314 |
|---|
| End bp | 2481315 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642593997 |
|---|
| Product | putative threonine-phosphate decarboxylase |
|---|
| Protein accession | YP_001858427 |
|---|
| Protein GI | 186476957 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00487781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.816406 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA TCATTCAGCA TGGCGGCAAC CTGCACGAAG CGGCACACCG CTACGACATT
CCGTATGACG CGTGGCTCGA TCTGTCGACG GGCATCAATC CGCATGGCTA CCCTGTGCCG
CCCGTTCCCG CCGATGCATG GCGCCGTCTG CCCGACAACG GGGATGGTTT CGCGGAACGT
GCAGCGCGCT ACTACGGCGC GCCGGATGCA TCGCATGTGT TGCCCGTCGC CGGAAGCCAG
GCGGCGATCC GCGCGCTGCC GCCGCTGCTT TCGCGCGGCA CGGTCGGCAT CGCGCCGCTG
ACGTATGGAG AATATGCGCC GGCGTTCGCG CGCGCGGGGC ATCGCGTGAC GACGCTCGAT
GTCGCGTGTG CCGTCTTGCC CGACGAGCTC ACACATGTCG TGGTCGTCAA TCCGAACAAC
CCGACAGCCG AGCATCTGAG CGCTCAGACG CTCTTGCAGT GGCATGCGAC GCTGAACGCA
CGCGGCGGCA CGTTGATCGT CGACGAAGCA TTCGCCGACG CGCTGCCGTC TCAATCGATT
GCCGCGCAGA CCTATCGCGA AGGACTCGTC GTGCTGCGCT CGCCGGGCAA GTTCTTCGGC
CTCGCCGGCG TGCGCGCGGG CTTCGTGCTG GCGCGTCCGC GATTGCTCGA ATCGCTCGAT
GACACGTTGG GCGCCTGGAC TGTCAGCGGA CCCGCGCGTC ATGCCGTCAG CGCAGCGTTT
GCCGACACGG CATGGCAAGC GGCCATGCGC GCGCAGCTCG CGAGCGAAAG CGCGCGGCTC
GCCGCGCTTC TGAGCGCCCA TCGCTTCCCG GTGCATGCGA CACCGCTATT CGCATGGATC
GCCGACGCGC GCGCCGTGCG AGTGCATCGC GCGCTCGCCG CGCAAGGCAT CTGGACGCGC
TTTTTCGCCC GTCCCGCGAG CGTGCGGTTC GGCCTGCCCG CAACCGACAG CGAGTGGGAC
CGCCTCGAAG CCGCGCTGCA TCGCACGATG ACAACGCTCT AG
|
|---|
| Protein sequence | MTQIIQHGGN LHEAAHRYDI PYDAWLDLST GINPHGYPVP PVPADAWRRL PDNGDGFAER
AARYYGAPDA SHVLPVAGSQ AAIRALPPLL SRGTVGIAPL TYGEYAPAFA RAGHRVTTLD
VACAVLPDEL THVVVVNPNN PTAEHLSAQT LLQWHATLNA RGGTLIVDEA FADALPSQSI
AAQTYREGLV VLRSPGKFFG LAGVRAGFVL ARPRLLESLD DTLGAWTVSG PARHAVSAAF
ADTAWQAAMR AQLASESARL AALLSAHRFP VHATPLFAWI ADARAVRVHR ALAAQGIWTR
FFARPASVRF GLPATDSEWD RLEAALHRTM TTL
|
|---|
| |