Gene Bphy_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2187 
Symboldcd 
ID6243673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2455539 
End bp2456108 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content57% 
IMG OID642593978 
Productdeoxycytidine triphosphate deaminase 
Protein accessionYP_001858408 
Protein GI186476938 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0717] Deoxycytidine deaminase 
TIGRFAM ID[TIGR02274] deoxycytidine triphosphate deaminase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0376333 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.174723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA AATCCGACAA GTGGATCCGG CGCATGGCCG AAGAGCACAA CATGATCGAG 
CCGTTCGCGC CGAATCAGGT GCGCGCGACG GAAGACGGTC GCAAGATCGT CAGCTACGGC
ACCTCGAGCT ACGGCTACGA CATTCGCTGT GCCGACGAAT TCAAGATCTT CACGAACATC
AACTCGACCA TCGTCGATCC GAAGAACTTT GACGAGAAAT CGTTTGTCGA TTTCAAGGGC
GACGTCTGCA TCATTCCGCC GAACTCGTTC GCGCTCGCGC GCACGGTCGA ATATTTCCGC
ATTCCGCGCA GCGTGCTGAC GGTGTGCCTC GGCAAGTCGA CGTATGCGCG CTGCGGCATC
ATCGTCAATG TGACGCCGTT CGAACCGGAG TGGGAAGGGC ACGTCACGCT CGAATTCTCG
AATACGACAC CTTTGCCTGC GAAAATCTAC GCGAACGAAG GCGTCGCGCA GGTGCTGTTC
TTCGAAAGCG ACGAGATTTG CGACGTGTCG TACGCGGATC GCGGCGGCAA GTATCAAGGT
CAGCACGGCG TAACGTTGCC TAAGACGTAA
 
Protein sequence
MSIKSDKWIR RMAEEHNMIE PFAPNQVRAT EDGRKIVSYG TSSYGYDIRC ADEFKIFTNI 
NSTIVDPKNF DEKSFVDFKG DVCIIPPNSF ALARTVEYFR IPRSVLTVCL GKSTYARCGI
IVNVTPFEPE WEGHVTLEFS NTTPLPAKIY ANEGVAQVLF FESDEICDVS YADRGGKYQG
QHGVTLPKT