Gene Bphy_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2053 
Symbol 
ID6243541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2302883 
End bp2303581 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content66% 
IMG OID642593846 
Producttwo component transcriptional regulator 
Protein accessionYP_001858277 
Protein GI186476807 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.745879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC TGAGCATTAC CGTCGTACTG ATCGAAGACG AACAACAGAT TCGCCGCTTC 
GTGCGGGCGT CACTGGAAGG CGAGGGGATG ACCGTGTACG ACGCGCCGAC GGGCAAACAG
GGACTAATCG AAGCGGCCAC ACGCAAGCCC GATCTCGTGA TCGTCGATCT GGGCTTGCCC
GACACCGATG GCCTCGACGT GATCCGCGAA CTGCGCGGCT GGAGCGAGTT GCCCATCATC
GTGCTGTCGG CGCGCACGCA GGAGAGCGAG AAGGTCGCGG CGCTCGATGC CGGCGCCGAC
GACTATCTGA CCAAGCCGTT TGGCGTGTCC GAGTTATTTG CGCGGATCCG CGCGCATCTA
CGCCGGCGCA ACCAGGGTGG TCCGGCCGAG ACGCCGCAGG TGCAGTTCGG CGGCGTGACC
GTCGATCTGG CCTTGCGGCA GGTCTCGCGC GACGGCGAGC CCGTGCATCT GACGCCGCTC
GAATACCGGC TGCTCGCGAC GCTCGTGCGT CATGCGGGGC GCGTGCTCAC GCATCGCCAG
TTGCTGCGCG ACGTGTGGGG CCCGTCGCAC GTCGAAAGCC ATCACTATCT GCGCATCTAC
ATGGCGCATT TGCGGCAGAA ACTGGAACGC GATCCGGCGC AGCCCGAGCA TATCGTCACG
GAGACGGGCG TCGGATATCG GCTGGTTGGC GTCGCGTGA
 
Protein sequence
MSDLSITVVL IEDEQQIRRF VRASLEGEGM TVYDAPTGKQ GLIEAATRKP DLVIVDLGLP 
DTDGLDVIRE LRGWSELPII VLSARTQESE KVAALDAGAD DYLTKPFGVS ELFARIRAHL
RRRNQGGPAE TPQVQFGGVT VDLALRQVSR DGEPVHLTPL EYRLLATLVR HAGRVLTHRQ
LLRDVWGPSH VESHHYLRIY MAHLRQKLER DPAQPEHIVT ETGVGYRLVG VA