| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1978 |
|---|
| Symbol | |
|---|
| ID | 6243467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 2229191 |
|---|
| End bp | 2230357 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642593771 |
|---|
| Product | peptidase M14 carboxypeptidase A |
|---|
| Protein accession | YP_001858203 |
|---|
| Protein GI | 186476733 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.228376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTAT CCATTACGAG CAACTTCGAC GCCGGCGCGA TCGAAGTCCT GTCCTGCGCG
CAGGCCGACA ACATCCGTTT GCGCGTGCGT CCGGACAGCC ACGCGGACTT CGCGCAGTGG
TTCTACTTCC GGCTGTCGGG TGGCCGAGGC GAGCGCTGCG TCATGACCTT CGAGAACGCT
GCCGACTGCG CATTCGCCGA AGGCTGGCGC GACTATCACG CCTGCGCGAG CTATGACCGT
GTGAACTGGT TCCGCGTGCC GACCTCGTAC GACGGCCGCG TGCTGACCAT CGATCACACG
CCCGATTTCG ACCGCGTCTA CTACGCGTAC TTCGAGCCAT ATAGCGAAGA GCGCCACTCG
GAATTTCTCG GCGCAGTCCA ACAGATGCCG CATGCTGCGC TGACGGAACT AGGCAAGACG
GTCGAAGGCC GGCCGATGTC GGTGTTGACC CTCGGCACGC CGACGCTGCG CGACGACGGT
ACGCTGAAGC CGAAGAAGAA AATCTGGATC ATCGCGCGTC AACATCCCGG CGAGACGATG
GCTGAGTGGT TCGTAGAAGG GCTGGTGAAG CGGCTGGTGG GCTGGGGCGA TTGGTCGGGC
GATCCCGTTG CGCGCAGGCT CTACGATTAC GCGGACTTCC ACATCGTACC GAACATGAAC
CCGGACGGCA GCGTGCACGG CAATCTGCGC ACGAATGCAG CGGGCGCGAA TCTGAATCGA
GAATGGATGG AGCCGGATGC CGCACGTAGT CCTGAAGTGC TGCTCGTGCG CGACGCGATC
CATGCGACGG GCTGCGATCT GTTTTTCGAC ATTCATGGCG ACGAAGCGCT GCCGTATGTG
TTCGTTGCGG GCTCGGAGAT GCTACCGAGC TTCACCGAGC GGCAACGCGA GGAACAGACG
GCGTTCATTG AGGGCTTCAA GCGCGCGAGT CCAGATTTCC AGGATAAGTA CGGTTACGAA
TCGAGCAAGT ATCGGCAAGA TGCGCTCAAG CTGGCGTCGA AGTATATCGG CAACGAGTTC
GGTTGCCTGT CGCTGACGCT GGAGATGCCG TTCAAGGACA ATGCAAATCT GCCCGACGAA
CGCATCGGCT GGAATGGCGA GCGCAGCGCG GCGCTCGGCG CGGCGATGCT GCAGGCTATC
CTCTGGCATA TGGAGGCCTT CGCCTGA
|
|---|
| Protein sequence | MTLSITSNFD AGAIEVLSCA QADNIRLRVR PDSHADFAQW FYFRLSGGRG ERCVMTFENA
ADCAFAEGWR DYHACASYDR VNWFRVPTSY DGRVLTIDHT PDFDRVYYAY FEPYSEERHS
EFLGAVQQMP HAALTELGKT VEGRPMSVLT LGTPTLRDDG TLKPKKKIWI IARQHPGETM
AEWFVEGLVK RLVGWGDWSG DPVARRLYDY ADFHIVPNMN PDGSVHGNLR TNAAGANLNR
EWMEPDAARS PEVLLVRDAI HATGCDLFFD IHGDEALPYV FVAGSEMLPS FTERQREEQT
AFIEGFKRAS PDFQDKYGYE SSKYRQDALK LASKYIGNEF GCLSLTLEMP FKDNANLPDE
RIGWNGERSA ALGAAMLQAI LWHMEAFA
|
|---|
| |