Gene Bphy_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1947 
Symbol 
ID6243436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2191732 
End bp2192151 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content61% 
IMG OID642593735 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_001858172 
Protein GI186476702 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.81805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGA GCCCTTTTGC CGGCGACGAA GACGACGGCC TCATGAACGA GATCAACATG 
ACGCCCCTCG TCGACGTCAT GTTGGTTCTC CTGATCGTGT TCATGGTGAC CATCCCCGTG
ATACGCCACG CGGTGAAGAT CGACCTGCCG CACGCGAGCA GCCAGAAGGA AGACATGAAG
CCCGCGCAGG TGACGGTATC GATCGACGCC GACGGCAACG TGATGTGGGA CGAACAGAAG
ATTTCCGACG ACACGCTGCA GGCGAAAATC GCCGCGGCTG CGCAGCAGAA TCCGCAGCCC
GAACTGCATC TGAGCGCGGA TCGCAAGGTC GCGTACGAGA AAGTTGCCGA GGTGATGTCG
GCTGCACAGG CGGGCGGTCT GACCAAGATC GGATTCGTCA CCGCGCCGAA GGCGCACTGA
 
Protein sequence
MAMSPFAGDE DDGLMNEINM TPLVDVMLVL LIVFMVTIPV IRHAVKIDLP HASSQKEDMK 
PAQVTVSIDA DGNVMWDEQK ISDDTLQAKI AAAAQQNPQP ELHLSADRKV AYEKVAEVMS
AAQAGGLTKI GFVTAPKAH