| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1941 |
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| Symbol | |
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| ID | 6243430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2186303 |
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| End bp | 2187826 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642593729 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001858166 |
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| Protein GI | 186476696 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.757012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGTATTG CGGACTCCCT GCAATACATC
AGCTACTACC ATCCGCTCGA TTACATCGAG GCGCTCGGCC GCGCATACGA GCTCGAAGAA
AGCCCCGCCG CCAAGGACGC CATCGCGCAG ATCCTGACGA ACAGCCGTAT GTGCGCGGAA
GGCAAGCGCC CGATCTGCCA GGACACGGGC ATCGTCACGG TATTCGTGAA GGTCGGCATG
GACGTGCGCT GGGATGGCGC GACGATGTCG GTCACCGACA TGATCAACGA AGGCGTGCGA
CGCGGTTATC TGAACCCGGA CAACGTGCTG CGCGCGTCGA TCGTGAGCCC GCCCGAAGGC
GGCCGCAAGA ACACGAAGGA CAACACCCCC GCCGTGATCC ACTACGAGAT CGTGCCGGGC
GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGCGGCGGCT CGGAGAACAA GTCGAAGTTC
GCGATGCTGA ACCCGTCGGA TTCGATCGTT GACTGGATCC TGAAGACCGT GCCGACGATG
GGCGCGGGCT GGTGCCCGCC CGGCATGCTC GGCATCGGCA TCGGCGGCAC GGCTGAAAAG
GCGATGGTCA TGGCGAAGGA ATCGCTGATG GACCCGATCG ACATTCAGGA CGTCATCGCT
CGCGGCCCGA AGGACTGGAT CGAAGAACTG CGTGTGGAAC TGCACGAGAA AGTCAACGCG
CTCGGTATCG GCGCGCAGGG CTTGGGCGGT CTCGCGACGG TGCTCGACGT GAAGATCATG
GCAGCGCCGA CGCACGCGGC ATCGAAGCCG GTCGCAATCA TCCCGAACTG CGCGGCCACG
CGCCACGCGC ACTTCACGCT CGACGGCTCG GGCGTCGCGA AGCTCACGCC GCCGCCGCTC
GACGCATGGC CGAAGGTCAC GTGGCAACCG AACACGGAAA CCAGCAAGCG CATCGACCTG
AACACGCTGA CGCCGGAAGA AGTCGCATCG TGGACGCCGG GCCAGACGCT CTTGCTGTCG
GGCAAGATGC TGACGGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCCAAG
GGCGAAAAGC TGCCCGTCGA CTTCACGAAC CGCGTGATCT ATTACGTCGG CCCGGTCGAC
CCGGTGCGCG ATGAAGCCGT CGGCCCGGCC GGCCCGACGA CGGCCACGCG CATGGACAAG
TTCACGGAAA CGATGCTCGC GCAAACGGGG CTGATCTCGA TGATCGGCAA GGCCGAGCGC
GGCCCCGTCG CGATCGAGGC GATCAGGAAG CACAAGGCTG CGTATCTGAT GGCCGTCGGC
GGTGCGGCGT ACCTCGTGTC GAAGGCGATC CGCAGCGCGA AGGTGCTTGC ATTCGAGGAC
CTCGGCATGG AAGCCATCTA TGAATTCGAC GTACAGGACA TGCCTGTGAC GGTCGCCGTC
GATTCGAACG GCACCTCGGT TCACCAGACG GGACCGAAGG AATGGCAGGC GAAGATCGGC
AAGATTCCCG TCGCGACGGC TTAA
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| Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIE ALGRAYELEE SPAAKDAIAQ ILTNSRMCAE
GKRPICQDTG IVTVFVKVGM DVRWDGATMS VTDMINEGVR RGYLNPDNVL RASIVSPPEG
GRKNTKDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF AMLNPSDSIV DWILKTVPTM
GAGWCPPGML GIGIGGTAEK AMVMAKESLM DPIDIQDVIA RGPKDWIEEL RVELHEKVNA
LGIGAQGLGG LATVLDVKIM AAPTHAASKP VAIIPNCAAT RHAHFTLDGS GVAKLTPPPL
DAWPKVTWQP NTETSKRIDL NTLTPEEVAS WTPGQTLLLS GKMLTGRDAA HKRIADMLAK
GEKLPVDFTN RVIYYVGPVD PVRDEAVGPA GPTTATRMDK FTETMLAQTG LISMIGKAER
GPVAIEAIRK HKAAYLMAVG GAAYLVSKAI RSAKVLAFED LGMEAIYEFD VQDMPVTVAV
DSNGTSVHQT GPKEWQAKIG KIPVATA
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