Gene Bphy_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1940 
Symbol 
ID6243429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2185670 
End bp2186245 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content61% 
IMG OID642593728 
Producthypothetical protein 
Protein accessionYP_001858165 
Protein GI186476695 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.713529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTGC TGCCTTCCGT GATCTTTATG AGCCGCTGGC TGCAGGTGCC GCTCTATCTC 
GGCCTGATCG TCGCGCAAGC CGTGTACGTC GTGCTGTTCC TCAAGGAAGT GTGGCACCTC
GTGTCGCACT CGATGACGCT CGACGAAACC AACATCATGC TCGTCGTACT TGGCCTGATC
GACGTCGTGA TGATCTCGAA CCTGCTGATC ATGGTGATCG TCGGCGGGTA TGAAACCTTT
GTCTCGCGCC TGGGCGTCGA AGGCCATCCC GACGAGCCCG AATGGCTCGA TCACGTGAAT
GCGGGCGTGC TGAAGGTGAA GCTGTCGATG GCGCTCATCA GCATCTCGTC GATCCATCTG
CTCAAGACCT TCATCAACCC GGACCAGCAC ACGCAACATG CCGTGATGTG GCAGGTCATC
ATCCACGTCG CGTTCCTCGT GTCCGCGGTG GTGATGGCGC TCGTCGACCG GCTGACCACA
CACACGCATC CGGCGCATTT TCACGAGCCC GCCGTGCGGG GCGCAGCCGC GTCCGGTGCC
CCTACAACGA TTTACAACTC CCCTGAAGGC GCGTGA
 
Protein sequence
MRLLPSVIFM SRWLQVPLYL GLIVAQAVYV VLFLKEVWHL VSHSMTLDET NIMLVVLGLI 
DVVMISNLLI MVIVGGYETF VSRLGVEGHP DEPEWLDHVN AGVLKVKLSM ALISISSIHL
LKTFINPDQH TQHAVMWQVI IHVAFLVSAV VMALVDRLTT HTHPAHFHEP AVRGAAASGA
PTTIYNSPEG A