| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1848 |
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| Symbol | |
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| ID | 6243337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2111627 |
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| End bp | 2114362 |
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| Gene Length | 2736 bp |
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| Protein Length | 911 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642593635 |
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| Product | 2-oxoacid dehydrogenase subunit E1 |
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| Protein accession | YP_001858073 |
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| Protein GI | 186476603 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.150409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000279834 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGGATT TATCGAGCGG TGCCCGCCCC GTTGTTGCCT TGACCCAGGC TCGCATCGAC
AGCGATCCGC AGGAGACGGC CGAATGGCTC GCCGCGCTGG ATGGCGTCGT GCAACATGTC
GGCCTCGAGC GCGCGCAGTA CCTGTTCGAC CGGCTGGCGG CGCACGCGCT CGGCAATGGG
GTCGCGACGG CGCGCGCGAA CGTCACGCCC TACGCAAACA CGATATCCGT CGATCAGCAG
CCGCCTTATC CCGGCGACCT CGACACGGAA GAAAAGCTCG CCGCCGCGTT GCGCTGGAAC
GCGCTCGCGA TGGTGGTGCG CGCCAATCGC GCGTACGGCG AATTGGGCGG CCACATTGCG
AGCTATGCTT CGGCGGCTGA TCTGTTCGAA GTCGGCTTCA ATCACTTCTT CCGCGCCGCG
AGCACTAGGC AAGACGGCAA CGATGCGCGC GGCGGCGATC TCGTCTACTT CCAGCCGCAT
TCGTCGCCGG GCGTGTACGC GCGCGCGTTC CTCGAAGGCT TTCTGGACGA GACGCATCTG
GAACACTATC GCCGCGAAAT CGCCGGGCCG GGCTTGTGTT CGTATCCGCA TCCGTGGCTG
ATGCCCGACT TCTGGCAGTT CCCGACGGGC TCGATGGGCA TCGGTCCCAT CAACGCGATC
TACCAGGCGC GCTTCATGCG CTATCTGCAG AACCGCGGCC TCCTGAAGAC GGAGGGCCGC
AAGGTGTGGG GCTTCTTCGG CGACGGCGAG ATGGACGAGC CGGAGTCGAT CGGTGCGCTG
TCGCTCGCGG CGCGCGAAGG GCTCGACAAC CTCGTGTTCG TGATCAATTG CAATTTGCAG
CGGCTCGACG GCCCCGTGCG CAGCAACGGC CGCATCATCG ACGAACTCGA AGCGCAGTTC
ACGGGCGCCG GCTGGAACGT GATCAAGGTG CTGTGGGGCT CGGACTGGGA TGCGCTGTTC
GCACGCGACC GCACGGGCGC CTTGCTGCGC GCGTTTGCCC ATACCGTCGA CGGCCAGTTC
CAGACCTTCT CGGCCAACGA CGGCGCGTAT AACCGCGAGC GCTTCTTCGG CCAGAATCCC
GAGCTCGAGG CGCTCGCCGC GCATCTGAGC AACGACGATA TCGACCGCTT GCGGCGCGGC
GGCCACGACG TGCGCAAGCT GCACGCCGCG TATGACCGTG CGTTGAAGCA TCGCGGCCAG
CCCACGGTGA TACTCGCGAA GACGATGAAG GGCTTCGGCA TGGGCTCCAT CGGCCAGGGG
CGCATGACGA CGCATCAGCA GAAGAAGCTC GACGTCGAGC AGCTGAAGGC GTTCCGCGAC
CGCTTCCGCC TGCCGTTGTC GGACGAGGAC GTCGAGCAAC TCAGGTTTTA CAAGCCAGCA
GAAAACAGCC CGGAAATGCA GTACCTGCAT GCACGCCGGG TTGCCCTCGG AGGCTATCTG
CCCAGAAGGC GGGCGGCGGC ATCGCGGACA CCGACCGTGC CCGCGCTGCC ATCCTGGGGG
CAATTCGCGC TGGAGGCGAA CGGCAAGGAG ATGTCGACCA CGATGGCCGT CGTGCGCATG
CTCGGCAGTC TGCTGAAGGA CGCGTCGCTG GGCCCGCGTG TCGTGCCTGT CGTCGCCGAT
GAAGCGCGGA CCTTCGGCAT GGCGAACCTG TTCCGCCAGG TGGGCATCTA TTCGCCGCTC
GGCCAGTTGT ATGAGCCGGA AGACATGGGC TCGATGCTGT ACTACCGCGA AGACACGGGC
GGCCAGATAC TCGAAGAGGG TATTTCCGAA GCAGGGGCCG TGTCGTCGTG GATCGCCGCG
GCCACGTCGT ATAGCGTGCA CGATCTCGCC ATGCTGCCGT TCTACATCTA CTACTCGATG
TTCGGCTTCC AGCGCATCGG CGACCTGATC TGGGCGGCAG CGGACCAGCG CGCGCGAGGC
TTCCTGATCG GCGCGACGGC GGGCAAGACG ACGCTCGGCG GCGAAGGGCT TCAGCATCAG
GACGGCACGA GTCATCTCGC GGCATCGACG GTGCCGAACT GCCGTTCATA CGATCCCGCG
TTTGCCTTCG AAGTCGCGCT GATCGTCGAT GAAGGCATGC GGGAGATGCT CGAACGTCAG
CGCGATGTGT TCTATTACCT GACCGTCACG AACGAGAACT ACGCACAGCC TTCGCTGCCT
GCAGCTGTGT CTGTCGATAC CGTGCGGGAA GGCGTGCTGA AGGGGATGTA TCCGCTCGAT
CAGGCATCGC TGGAAACGGC GCAGGTGCAA TTGCTCGGCG CGGGCGCGAT TCTCGGCGAA
GTGCAGGCAG CCGCGCGCAT GCTGAGGGAC GACTGGAACA TCCCGGCTGC CGTATGGAGC
GTGACGAGCT TCACCGAACT GCATCGTAAC GGCGTTGCAG CGGAACGTGC GGAGCGCCTC
TTCGACGACG CGCAACACGC GTTGCCGTAT GTGACGTCCG CGCTCGCTGC AGTGCGCGGC
CCGGTGATCG CCGCGACCGA CTATGTGCGC GCCGTGCCCG AACTGATCCG CGCGTATGTG
CCGCGCCGCT ACGTGACGCT CGGCACCGAC GGCTTCGGGC GCAGCGACAC GCGCGCTGCG
CTGCGCGCGT TCTTCGAAGT GGATCGCGCG TCGATCGCGA TTGCCGCGTT GAAGGCGCTC
GCCGACGAGG GGGCGAGCGA ACGCGACATC GTCAGGCAGG CGATCGACCG TTATGGCAAA
CGCGATGGGG ACAACGGCGC GCCCTGGGAG AGGTGA
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| Protein sequence | MTDLSSGARP VVALTQARID SDPQETAEWL AALDGVVQHV GLERAQYLFD RLAAHALGNG
VATARANVTP YANTISVDQQ PPYPGDLDTE EKLAAALRWN ALAMVVRANR AYGELGGHIA
SYASAADLFE VGFNHFFRAA STRQDGNDAR GGDLVYFQPH SSPGVYARAF LEGFLDETHL
EHYRREIAGP GLCSYPHPWL MPDFWQFPTG SMGIGPINAI YQARFMRYLQ NRGLLKTEGR
KVWGFFGDGE MDEPESIGAL SLAAREGLDN LVFVINCNLQ RLDGPVRSNG RIIDELEAQF
TGAGWNVIKV LWGSDWDALF ARDRTGALLR AFAHTVDGQF QTFSANDGAY NRERFFGQNP
ELEALAAHLS NDDIDRLRRG GHDVRKLHAA YDRALKHRGQ PTVILAKTMK GFGMGSIGQG
RMTTHQQKKL DVEQLKAFRD RFRLPLSDED VEQLRFYKPA ENSPEMQYLH ARRVALGGYL
PRRRAAASRT PTVPALPSWG QFALEANGKE MSTTMAVVRM LGSLLKDASL GPRVVPVVAD
EARTFGMANL FRQVGIYSPL GQLYEPEDMG SMLYYREDTG GQILEEGISE AGAVSSWIAA
ATSYSVHDLA MLPFYIYYSM FGFQRIGDLI WAAADQRARG FLIGATAGKT TLGGEGLQHQ
DGTSHLAAST VPNCRSYDPA FAFEVALIVD EGMREMLERQ RDVFYYLTVT NENYAQPSLP
AAVSVDTVRE GVLKGMYPLD QASLETAQVQ LLGAGAILGE VQAAARMLRD DWNIPAAVWS
VTSFTELHRN GVAAERAERL FDDAQHALPY VTSALAAVRG PVIAATDYVR AVPELIRAYV
PRRYVTLGTD GFGRSDTRAA LRAFFEVDRA SIAIAALKAL ADEGASERDI VRQAIDRYGK
RDGDNGAPWE R
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