Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1813 |
Symbol | |
ID | 6243304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2073014 |
End bp | 2073718 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642593603 |
Product | histidine utilization repressor |
Protein accession | YP_001858041 |
Protein GI | 186476571 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.167757 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAGCA TGAACGCACC GGCTTATCAG GGAATCAAGG ACTTCATCCT CGCCCGCATT CACGCGGGCG AATGGAGCGA AGGCCATCAG GTTCCATCGG AAAACGAGCT TGCGCGCGAA TTCAACGTCG CGCGCATGAC GGTCAACCGG GCGCTGCGCG AGCTGACGGC CGAGCAGGTG CTGACGCGCG TTCAGGGCTC GGGCACGTTC GTCGCGCGAC CGAAGTACGA GTCGACGCTA GTCGCGATCC GCAGCATTTC CGACGAGATC GTCGCGCGCG GTCATTGCTA TCACGCGAAC GTGCTGCACG TGGGCGCCGC GATCGCCGAC GAAGAACTCG CCGCCGAAAT GCAGGTGAGC GCGGGCAGTC CCGTCTTCCA TTCGCGCGTG CTGCACTTCG AGAACGACGA GCCCGTCCAG CTCGAAGAGC GCTGGGTGAA TCCCGTCGTC GCCCCCGACT ATGCGCTGCA GGACTTCACG AACACGACAC CTAACCAGTA TCTCGTGCGC GTCGCGCCGC TGCAGCGCGT TGAGTACCGC ATCGAAGCCT CCGCGCCGGA CGCCGACAAC CGCCGGCTTC TGACGATGGA CGACGCCGAA CCTTGCCTCG TGCTGCACCG GCGCACGTGG TCGCAAGGGG TGGTCGCGTC CGTGGCCAAT CTCTGGCACC CCGGCAACCG TTACCGGTTC ACCGGCCACT TCTGA
|
Protein sequence | MPSMNAPAYQ GIKDFILARI HAGEWSEGHQ VPSENELARE FNVARMTVNR ALRELTAEQV LTRVQGSGTF VARPKYESTL VAIRSISDEI VARGHCYHAN VLHVGAAIAD EELAAEMQVS AGSPVFHSRV LHFENDEPVQ LEERWVNPVV APDYALQDFT NTTPNQYLVR VAPLQRVEYR IEASAPDADN RRLLTMDDAE PCLVLHRRTW SQGVVASVAN LWHPGNRYRF TGHF
|
| |