Gene Bphy_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1812 
Symbol 
ID6243303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2071261 
End bp2072949 
Gene Length1689 bp 
Protein Length562 aa 
Translation table11 
GC content64% 
IMG OID642593602 
Producturocanate hydratase 
Protein accessionYP_001858040 
Protein GI186476570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.596639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.348083 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACC CGAAGCACAT CGACCCGCGT CTCGACCCAT CCCGCACGAT CCGCGCGCCG 
CGCGGCAGCG AGAAAACCTG CAAGACCTGG ATCGCGGAAG CCGCGTACCG GATGATCCAG
AACAACCTGG ATCCCGAAGT GGCCGAGCAT CCGCATGCGC TGGTGGTCTA CGGCGGCATC
GGCCGCGCGG CGCGCAACTG GGATTGCTAC GACCAGATCC TCGCGTCGCT GAAGAACCTC
GAAGAAAACG AGACGCTGCT GATCCAGTCG GGCAAGCCCG TCGGCGTGTT CCGCACGCAT
GCCGATGCGC CGCGCGTGCT GCTCGCGAAT TCGAACCTCG TGCCGCACTG GGCGAACTGG
GATCACTTCC ACGAGCTCGA CCGCAAGGGC CTGATGATGT ACGGCCAGAT GACGGCGGGC
AGCTGGATCT ATATCGGCAG CCAGGGGATC GTGCAGGGCA CGTATGAAAC GTTCTTCTCG
GTGGCAAACC AGCACTTCAA CGGCGATCCG AAGGGCCGCT GGATCCTGAC GGGCGGTCTC
GGCGGCATGG GCGGCGCGCA GCCGCTCGCG GCGACGATGG CGGGCTTTTC GATGATCGCC
GTCGAATGCG ACGAGACGCG CATCGACTTC CGTCTGAAGA CGCGTTACGT TGACAAGAAG
GCGAAGACGC TCGACGAAGC GCTCGCGATG ATCGACGAAG CGAAGAAGAC GGGCAACCCC
GTGTCAGTCG GCCTGCTCGG CAATGCCGCC GACGTGTTCG CGGAACTGGT GACGCGCAAT
ATCACGCCGG ACTGCGTGAC CGACCAGACG AGCGCGCACG ATCCGATTCA CGGTTATCTG
CCGCAAGGCT GGAAGATCGA AGACTGGCGC GAGCGTCAGA AGACGGACCC GCAAAGCATC
GTGACGCCCG CGAAGCAGTC GATGGCCAAA CAGGTTCAGG CGATGCTCAC GCTGCAGGAA
CGCGGCGCGG CCACACTCGA CTACGGCAAC AACATCCGTC AGATGGCGCT GGAAATGGGC
GTGCAGAACG CGTTCGATTT CCCGGGCTTC GTGCCCGCGT ATATCCGGCC GCTTTTCTGC
GAAGGCAAGG GCCCGTTCCG CTGGGTCGCG CTGTCGGGCG ATCCCGAAGA CATCTACAAG
ACGGATGCGA AGGTCAAGGA ACTGATTCCC GACGATTCGC ACCTGCACAA CTGGCTCGAC
ATGGCGCGCG AACGCATTGC GTTCCAGGGG CTGCCGGCGC GTATCTGCTG GGTCGGCGTG
AAGGATCGCT ATCGCCTCGG CCAGGCATTC AACGAGATGG TCAGGAAGGG CGAGCTGAAA
GCGCCCATCG TGATCGGTCG CGATCACCTG GACACGGGTT CGGTGGCGAG CCCGAACCGC
GAAACGGAAT CGATGAAAGA CGGCTCGGAT GCTGTCAGCG ACTGGCCGCT GCTCAACGCA
CTGCTGAACA CGGCAGGCGG TGCGTCGTGG GTATCGCTGC ATCACGGCGG CGGCGTCGGC
ATGGGCTTCT CGCAGCACTC GGGCGTCGTG ATCGTCGCTG ACGGAACGGA CGCCGCGCAT
GAGCGCCTCG GCCGCGTGCT CTTCAACGAT CCCGCGACGG GCGTGATGCG TCACGCGGAC
GCCGGCTACG AACTCGCGCA GCAGACGGCG CGCGAAGCCG GTCTCAAGCT GCCCATGCTG
GGCCGCTGA
 
Protein sequence
MNNPKHIDPR LDPSRTIRAP RGSEKTCKTW IAEAAYRMIQ NNLDPEVAEH PHALVVYGGI 
GRAARNWDCY DQILASLKNL EENETLLIQS GKPVGVFRTH ADAPRVLLAN SNLVPHWANW
DHFHELDRKG LMMYGQMTAG SWIYIGSQGI VQGTYETFFS VANQHFNGDP KGRWILTGGL
GGMGGAQPLA ATMAGFSMIA VECDETRIDF RLKTRYVDKK AKTLDEALAM IDEAKKTGNP
VSVGLLGNAA DVFAELVTRN ITPDCVTDQT SAHDPIHGYL PQGWKIEDWR ERQKTDPQSI
VTPAKQSMAK QVQAMLTLQE RGAATLDYGN NIRQMALEMG VQNAFDFPGF VPAYIRPLFC
EGKGPFRWVA LSGDPEDIYK TDAKVKELIP DDSHLHNWLD MARERIAFQG LPARICWVGV
KDRYRLGQAF NEMVRKGELK APIVIGRDHL DTGSVASPNR ETESMKDGSD AVSDWPLLNA
LLNTAGGASW VSLHHGGGVG MGFSQHSGVV IVADGTDAAH ERLGRVLFND PATGVMRHAD
AGYELAQQTA REAGLKLPML GR