| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1732 |
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| Symbol | |
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| ID | 6243223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1976972 |
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| End bp | 1978765 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642593522 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001857960 |
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| Protein GI | 186476490 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGACA TCCACGACAC CGATTCGTCC GAATCCGAGC GCGCCGTCGC TGCTGCGCGC
CCCGACGAAA CGCGCAACGC GAAAGCGTCA GCGGGCGATA CCGAGCGGAC CGGGCAAGCG
CCGGACACCG AGGGCGACGA GCGCCCCCGC CGCGGCCTGC GCCGTGGTCC GCGTAGCCTG
ATCGCGCGTC GCCGCGCGGG GGCAAAGGCA AAGACGGCCG ATGCCGAGAC TACGCAGCCG
GCGCCCGCCG TGACGGAAGC GCCGCCCGAC GGCGAAGTCG TCGCGCCCAT GCGCGCGCCG
CGCAAGGACG CGGGCGCGAA GGCGCAAGGC CAGGGCGGCC GTCGTGCCGG CGGCAAGCAG
GGTGGCCAAA GCGGTCAACC GGGGGCTCGC CAGGGCGGCC AGCGCAAGGG CCGCGGCAAT
GCGGCCGGCG ATGCCGCGCC TGCAGCCACC GAAGGCGACA AGCAGGACGA CCTGTTCGCC
TATGTGACGT CGCCCGCCTT CGACGCCGAC AACTCGGCAA CGGGCGGTGT GCGCGCGCCG
ATGCTGCGCC GCGGCCGTCC CGCCGCGCCT AAGCGCGTTC TGTCGCCGGA CGACGACGCG
CCCAAGCTGC ACAAGGTGCT CGCCGACGCC GGCATGGGCT CGCGTCGCGA CATGGAAGAG
CTGATCGTCG CGGGTCGCGT GTCGGTGAAC GGCGAGCCGG CGCACATCGG TCAGCGCATC
CTGCCTACCG ACCTCGTACG CATCAATGGC AAGCCGATCA AGCGCAAGCT GCAGAGCAAG
CCGCCGCGCG TGCTGCTGTA TCACAAGCCG ACGGGCGAAA TCGTCAGCCA TGCCGATCCG
GAAGGCCGTC CGTCCGTGTT CGACAAGCTG CCGCCGATGA AGACGGCGAA ATGGCTTGCC
GTCGGTCGTC TCGACTTCAA TACGGAAGGT CTGCTGATGC TGACGACGTC GGGCGATCTG
GCGAACCGGT TCATGCATCC GCGTTACAGC GTCGAACGCG AATATGCGGT GCGCGTGGTC
GGCGAGCTGA CGGAAGGCAA CCGGCAGAAA CTGTTGCACG GCGTCGAACT CGACGACGGT
CCGGCGAACT TCCTGCGCAT CCGCGACGGC GGCGGCGAAG GGACGAACCA CTGGTATCAC
GTCGCGCTCG CCGAAGGTCG TAACCGCGAA GTGCGCCGCA TGTTCGAAGC GGTCGGCCTG
ATGGTGAGCC GGCTGATCCG TACGCGTCAC GGCCCGATCG CGCTGCCGCG CGGTCTGAAG
CGTGGGCGCT GGGAAGAGCT CGAGGACAAC CAGGTGCGCA GCCTGATGGC GTCGGTGGGT
TTGAAGGCGC CGGCAGAAGA GAAGGGCGCC GGTCGCCGTG GCGAGCCCGA GCGCCGTCAA
CCGGATCCGA TGCAGACCTC GATGGGCTTC ATCAATCGCG AACCCGTGCT GATGTCGCAT
GGCCGTTTCG ACCAGCAGCA GCCACGCGGC GGCGGTCCTG GTCGCCGCGG CGGCAAGGGC
GCAGGCGCAT TCGGCGCGCT GAACACCGGC TTGGGCGGCG GCTTCGGCAA TACGAACGGC
AACCGCGGCG AAGGCCGTGG CGGCCGGGGT GGCCGCGATG TCGACGGCAA TCGGGCGCCG
TCGGGCAACC GTGCGGCCGC AGGCGGCGGT AATGCGAAGC GTGGCGGTGG CGGCGCTGGT
AATCGCGCGC AAAACGGCAA CCGCGCGGGC AACGGCAATC GCGCGGGCGG CAATCCGAAC
GCTGGCGGCA ATCGCAGCGG CGGCGCGCAG CGCAACCGTT CCCGCGGACG CTGA
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| Protein sequence | MTDIHDTDSS ESERAVAAAR PDETRNAKAS AGDTERTGQA PDTEGDERPR RGLRRGPRSL
IARRRAGAKA KTADAETTQP APAVTEAPPD GEVVAPMRAP RKDAGAKAQG QGGRRAGGKQ
GGQSGQPGAR QGGQRKGRGN AAGDAAPAAT EGDKQDDLFA YVTSPAFDAD NSATGGVRAP
MLRRGRPAAP KRVLSPDDDA PKLHKVLADA GMGSRRDMEE LIVAGRVSVN GEPAHIGQRI
LPTDLVRING KPIKRKLQSK PPRVLLYHKP TGEIVSHADP EGRPSVFDKL PPMKTAKWLA
VGRLDFNTEG LLMLTTSGDL ANRFMHPRYS VEREYAVRVV GELTEGNRQK LLHGVELDDG
PANFLRIRDG GGEGTNHWYH VALAEGRNRE VRRMFEAVGL MVSRLIRTRH GPIALPRGLK
RGRWEELEDN QVRSLMASVG LKAPAEEKGA GRRGEPERRQ PDPMQTSMGF INREPVLMSH
GRFDQQQPRG GGPGRRGGKG AGAFGALNTG LGGGFGNTNG NRGEGRGGRG GRDVDGNRAP
SGNRAAAGGG NAKRGGGGAG NRAQNGNRAG NGNRAGGNPN AGGNRSGGAQ RNRSRGR
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