| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1727 |
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| Symbol | truB |
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| ID | 6243218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1970128 |
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| End bp | 1971057 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593517 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001857955 |
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| Protein GI | 186476485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.577271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGA ACCAACGTCC CAAGGTGCCG CGTCGCGCGC TGGATGGTGT GTTGCTGCTC
GACAAGCCTG TGGGGCTGTC GAGTAACGAC GCGCTGATCC GCGCGAAGCG CCTGTATCTT
GCGAAGAAGG CGGGGCACAC GGGCACGCTC GATCCGCTCG CGTCGGGGCT GTTGCCGCTC
TGCTTCGGCG AAGCAACGAA GTTTTCGCAG GATCTGCTGG AAGCGGACAA GACGTATGAA
GCGACGATGC GGCTCGGCAT TCGCACGACG ACGGGCGATG CCGAAGGCGA GGCGATCGAA
ACGCGCGACG TGACATGCGA TCAGGCTGCC GTCGAGCAGA GGCTCGTGCA GTTTCGCGGC
GACATCGTTC AGGTGCCGCC GATGTATTCG GCGCTCAAGC GCGGCGGCAA GCCGCTGTAC
GAGTACGCGC GCGCCGGGCA GACGGTCGAG CGCGAAGGGC GCCAGGTGAC GATTCACGCG
CTGGAACTCA TCGCGTGTGA TTTGCCTGAT GTGACTTTTC GTGTGACGTG CAGCAAGGGT
ACGTATGTTC GTACGCTGGC CGAGGATATC GGCGAAGCGC TCGGATGCGG GGCACATCTG
GTGATGTTGC GGCGTACTGG CGTCGGGGCG TTGACGCTGG CGAATTCGGT GACGCTGGAC
GCGTTGTCCG ATGCGGCGCA AAGCGAGCGT GATGCGTGGC TGCAGCCTGT CGATGCGTTG
CTGTCGACGT TTCCTTCCGT TCAACTGGAT GAGGAAGCGA CCCGGCGATT TTTGCATGGC
CAACGGTTGA AGTTGACCGA TCTTGCTGTC GACGACGGTG TTTTGCTGGC GGCTGCTCGT
ACGCGCGTGT ATGGCAGCAA AGGGAAACTG CTTGGCGTCG CGAAAGCCGC CGACGGTGTG
CTGGCGCCCG AGCGTCTCAT CGTGAGCTAG
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| Protein sequence | MTQNQRPKVP RRALDGVLLL DKPVGLSSND ALIRAKRLYL AKKAGHTGTL DPLASGLLPL
CFGEATKFSQ DLLEADKTYE ATMRLGIRTT TGDAEGEAIE TRDVTCDQAA VEQRLVQFRG
DIVQVPPMYS ALKRGGKPLY EYARAGQTVE REGRQVTIHA LELIACDLPD VTFRVTCSKG
TYVRTLAEDI GEALGCGAHL VMLRRTGVGA LTLANSVTLD ALSDAAQSER DAWLQPVDAL
LSTFPSVQLD EEATRRFLHG QRLKLTDLAV DDGVLLAAAR TRVYGSKGKL LGVAKAADGV
LAPERLIVS
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