Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1724 |
Symbol | |
ID | 6243215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1965222 |
End bp | 1966769 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642593514 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001857952 |
Protein GI | 186476482 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTAC ACGCAAAGAG TCGAGCGATG AACTTCCTTC CTTGGCCCGC GCCTGCCTCG TCACACCGGG CGGCCGTCGC TGCAGCCGTG GCGGCGTTCG CCCTCGCCGG CTGCGCGAAC TACTTCGATC TCAAGGACGA CAGGCAGATC GCGTCGACCT CGCAGTTCGA GGCGTCACAG AGCCTGCCCG CGCAAGGCGG CCAATGGCCG GCGCTCGACT GGGCGAACCA GTTCGGCGAT CCGCAACTGC CGAAGCTGAT CGCGGAAGCG CTCGAAGGCA ATCCGTCAAT CGCGCAGGCG CAGGCGCGCA TCGCGAAGGC GTCGTCCTAT ATCGAAACCT CGAAGTCGGC GCTCTATCCG AAGGTCGAGG GCAGCTATTC GTGGACCCGC GAGCTGTACT CTGCCAATGC GCTGTTTCCG CCGCCGTACG GCGGCACGTG GTACAGCGAG AACAATGTGC TCGCCAGCGC GTCGTGGGAT CTCGACTTGT GGGGTAAGAA CCGGGAACGG CTCGGCCAGG CTGTGTCGCA GGAAAAAGCT GCCGAAGCCG ACATGCAGCA GGCCCGCGTG ACCCTCGCCG CGTCGGTCGC GCGTACCTAC AACTCGCTCG CGCAGCTGTA CGCGCTGCGC GACATCGCCG AGCGCGAAAT CAAGAACCGC CAGACGATCG GCGCGATCAC GAACGACCGC GTGCGGGCCG GCCTCGACAC GAACGTCGAG CGTCAGACGG CCAATGGCAA CATCGCGACC AGTCAGTCGA ACCTGACGGA GCTGGACGGC CAGATCACGA GCACGCGCTA CGAACTCGGC ACGCTGCTCG GCAAAGGGCC TGACCGCGGC CTGCAGATCG CCATGCCGGT GTTCGATCCC GGCAGCGCCG TTTCGCTGCC CGACAACGTG CCCGCCGACC TCGTGTCGCG CCGGCCGGAC ATCGTCGCCG CGCGCTGGCA GGTCGAAGCC GCGATGCACA ACGTGAAGGA AGCCAAGGCC GAGTTTTTTC CTGACGTGAA TCTCGCGGCC GCGTTCGGCT TCGACGCGTT CGGCTGGAGC AAATTTCTGA CGTCGTCGAG CCGTCAGATC CAGTTCGGGC CGGCCATCCA TCTGCCGATT TTCGATGCCG GCGCGCTGCG CTCGCAGCTC AAGGGCCGCT TCGCCGATTT CGACCTCGAC GTCGCGAACT ACAACCAGAC GCTGATCGGC GCGCTCTCCG ACGTCGCCAC GCAGATTTCG TCGATCCGTT CCATCGACAG GCAGGCGGGC GACGCACAGC GCGCGCTCGA TGCATCGACG AAAGCGTACG AACTCGCCGT GATCCGCTAC AAGGCCGGTT TGTCGCCGCA GTTGCAGGTA CTGACGGCCG ACCAGAACCG CCTCGCTGCC GAGCAGACGG TGACGAACCT CAAGATGCGC CGGCGCGATC TGCAATTCGC GCTGATCAAG GCGCTCGGCG GCGGTTTCGA CGCGACGCAG ACGGGCCTCG TCGTGCCGAC GGATACGCCT CCTGCATCGT CGGCAGCTGC GGCGCCGGCA ACGCACGCGG CGAACTAG
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Protein sequence | MSLHAKSRAM NFLPWPAPAS SHRAAVAAAV AAFALAGCAN YFDLKDDRQI ASTSQFEASQ SLPAQGGQWP ALDWANQFGD PQLPKLIAEA LEGNPSIAQA QARIAKASSY IETSKSALYP KVEGSYSWTR ELYSANALFP PPYGGTWYSE NNVLASASWD LDLWGKNRER LGQAVSQEKA AEADMQQARV TLAASVARTY NSLAQLYALR DIAEREIKNR QTIGAITNDR VRAGLDTNVE RQTANGNIAT SQSNLTELDG QITSTRYELG TLLGKGPDRG LQIAMPVFDP GSAVSLPDNV PADLVSRRPD IVAARWQVEA AMHNVKEAKA EFFPDVNLAA AFGFDAFGWS KFLTSSSRQI QFGPAIHLPI FDAGALRSQL KGRFADFDLD VANYNQTLIG ALSDVATQIS SIRSIDRQAG DAQRALDAST KAYELAVIRY KAGLSPQLQV LTADQNRLAA EQTVTNLKMR RRDLQFALIK ALGGGFDATQ TGLVVPTDTP PASSAAAAPA THAAN
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