Gene Bphy_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1724 
Symbol 
ID6243215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1965222 
End bp1966769 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content66% 
IMG OID642593514 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001857952 
Protein GI186476482 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTAC ACGCAAAGAG TCGAGCGATG AACTTCCTTC CTTGGCCCGC GCCTGCCTCG 
TCACACCGGG CGGCCGTCGC TGCAGCCGTG GCGGCGTTCG CCCTCGCCGG CTGCGCGAAC
TACTTCGATC TCAAGGACGA CAGGCAGATC GCGTCGACCT CGCAGTTCGA GGCGTCACAG
AGCCTGCCCG CGCAAGGCGG CCAATGGCCG GCGCTCGACT GGGCGAACCA GTTCGGCGAT
CCGCAACTGC CGAAGCTGAT CGCGGAAGCG CTCGAAGGCA ATCCGTCAAT CGCGCAGGCG
CAGGCGCGCA TCGCGAAGGC GTCGTCCTAT ATCGAAACCT CGAAGTCGGC GCTCTATCCG
AAGGTCGAGG GCAGCTATTC GTGGACCCGC GAGCTGTACT CTGCCAATGC GCTGTTTCCG
CCGCCGTACG GCGGCACGTG GTACAGCGAG AACAATGTGC TCGCCAGCGC GTCGTGGGAT
CTCGACTTGT GGGGTAAGAA CCGGGAACGG CTCGGCCAGG CTGTGTCGCA GGAAAAAGCT
GCCGAAGCCG ACATGCAGCA GGCCCGCGTG ACCCTCGCCG CGTCGGTCGC GCGTACCTAC
AACTCGCTCG CGCAGCTGTA CGCGCTGCGC GACATCGCCG AGCGCGAAAT CAAGAACCGC
CAGACGATCG GCGCGATCAC GAACGACCGC GTGCGGGCCG GCCTCGACAC GAACGTCGAG
CGTCAGACGG CCAATGGCAA CATCGCGACC AGTCAGTCGA ACCTGACGGA GCTGGACGGC
CAGATCACGA GCACGCGCTA CGAACTCGGC ACGCTGCTCG GCAAAGGGCC TGACCGCGGC
CTGCAGATCG CCATGCCGGT GTTCGATCCC GGCAGCGCCG TTTCGCTGCC CGACAACGTG
CCCGCCGACC TCGTGTCGCG CCGGCCGGAC ATCGTCGCCG CGCGCTGGCA GGTCGAAGCC
GCGATGCACA ACGTGAAGGA AGCCAAGGCC GAGTTTTTTC CTGACGTGAA TCTCGCGGCC
GCGTTCGGCT TCGACGCGTT CGGCTGGAGC AAATTTCTGA CGTCGTCGAG CCGTCAGATC
CAGTTCGGGC CGGCCATCCA TCTGCCGATT TTCGATGCCG GCGCGCTGCG CTCGCAGCTC
AAGGGCCGCT TCGCCGATTT CGACCTCGAC GTCGCGAACT ACAACCAGAC GCTGATCGGC
GCGCTCTCCG ACGTCGCCAC GCAGATTTCG TCGATCCGTT CCATCGACAG GCAGGCGGGC
GACGCACAGC GCGCGCTCGA TGCATCGACG AAAGCGTACG AACTCGCCGT GATCCGCTAC
AAGGCCGGTT TGTCGCCGCA GTTGCAGGTA CTGACGGCCG ACCAGAACCG CCTCGCTGCC
GAGCAGACGG TGACGAACCT CAAGATGCGC CGGCGCGATC TGCAATTCGC GCTGATCAAG
GCGCTCGGCG GCGGTTTCGA CGCGACGCAG ACGGGCCTCG TCGTGCCGAC GGATACGCCT
CCTGCATCGT CGGCAGCTGC GGCGCCGGCA ACGCACGCGG CGAACTAG
 
Protein sequence
MSLHAKSRAM NFLPWPAPAS SHRAAVAAAV AAFALAGCAN YFDLKDDRQI ASTSQFEASQ 
SLPAQGGQWP ALDWANQFGD PQLPKLIAEA LEGNPSIAQA QARIAKASSY IETSKSALYP
KVEGSYSWTR ELYSANALFP PPYGGTWYSE NNVLASASWD LDLWGKNRER LGQAVSQEKA
AEADMQQARV TLAASVARTY NSLAQLYALR DIAEREIKNR QTIGAITNDR VRAGLDTNVE
RQTANGNIAT SQSNLTELDG QITSTRYELG TLLGKGPDRG LQIAMPVFDP GSAVSLPDNV
PADLVSRRPD IVAARWQVEA AMHNVKEAKA EFFPDVNLAA AFGFDAFGWS KFLTSSSRQI
QFGPAIHLPI FDAGALRSQL KGRFADFDLD VANYNQTLIG ALSDVATQIS SIRSIDRQAG
DAQRALDAST KAYELAVIRY KAGLSPQLQV LTADQNRLAA EQTVTNLKMR RRDLQFALIK
ALGGGFDATQ TGLVVPTDTP PASSAAAAPA THAAN