| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1722 |
|---|
| Symbol | |
|---|
| ID | 6243213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1962532 |
|---|
| End bp | 1964358 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593512 |
|---|
| Product | GTP-binding protein TypA |
|---|
| Protein accession | YP_001857950 |
|---|
| Protein GI | 186476480 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGCG CTCTCCGTAA CATCGCCATC ATCGCTCACG TCGACCACGG CAAAACCACG
CTCGTCGACC AGCTGCTCCG CCAGTCCGGC ACCTTTCGCG AAAACCAGCA GGTCGCTGAA
CGCGTGATGG ACTCGAACGA CATCGAGAAA GAGCGTGGCA TCACGATTCT CGCCAAGAAC
TGCGCCGTGC AGTACGAGGG CACTCACATC AACATCGTCG ACACGCCGGG CCACGCCGAC
TTCGGCGGCG AAGTGGAACG CGTGCTGTCG ATGGTCGATT CCGTGCTGCT GCTCGTCGAC
GCCGTCGAAG GCCCGATGCC GCAAACCCGC TTCGTGACGA AGAAGGCGCT CGCGCTGGGT
CTCAAGCCGA TCGTCGTGAT CAACAAGATC GACCGTCCGG GCGCGCGTAT CGACTGGGTG
ATCAACCAGA CGTTCGACCT GTTCGACAAG CTGGGTGCGA CGGAAGACCA GCTCGATTTC
CCGATCGTCT ACGCGTCGGG TCTGAACGGT TACGCCGGCC TCGATCCGAG CGTGCGCGAA
GGCGACATGC GTCCGCTGTT CGAAGCCATT CTGGAGCACG TGCCCGTGCG TCCGGCCGAT
CCGGACGGTC CGCTGCAGTT GCAGATCACG TCGCTCGACT ATTCGACGTA CGTCGGCCGT
ATCGGCGTGG GCCGTATCAC GCGCGGCCGC ATCAAGCCGG GCCAGCAGGT CGTGCTGCGC
TTCGGTCCGG AAGGCGAAAT CCTGAACCGC AAGATTAACC AGGTGCTGTC GTTCGAAGGT
CTCGAGCGCG TGCAGGTCGC CGAAGCTGAA GCCGGCGACA TCGTGCTGAT CAACGGTATC
GAAGAAGTCG GCATCGGCGC GACGATCTGC GCGCCGGAAG CGCCCGAAGC GCTGCCGATG
ATCACCGTCG ACGAACCGAC GCTGACGATG AACTTCCTCG TCAACTCGTC GCCGCTCGCG
GGCAAGGAAG GCAAGTTCGT CACGAGCCGC CAGATCCGCG ACCGCCTGAT GAAGGAGCTC
AACCACAACG TCGCGCTGCG CGTGAAAGAT ACGGGCGACG AAACGGTGTT CGAAGTGTCG
GGCCGTGGCG AGCTGCACCT GACCATTCTC GTCGAGAACA TGCGCCGCGA AGGCTACGAA
CTGGCCGTGT CGCGTCCGCG CGTCGTGCTG CATGAAGTCG ACGGCGTGAA GCACGAGCCG
TACGAACTGC TGACCGTCGA CGTCGAAGAC ACGCATCAGG GCGGCGTGAT GGAAGAGCTG
GGTCGCCGCA AGGGCGAAAT GCTCGATATG GCGTCCGACG GCCGCGGCCG CACGCGTCTC
GAGTACCGCA TTCCGGCGCG CGGCCTGATC GGCTTCCAGG GCGAGTTCAT GACGCTCACG
CGCGGCACGG GCCTGATGAG CCATGTGTTC GACGAGTACC TGCCGCTCAA GGAAGGCTCG
CTGGGCGAGC GCCGCAACGG CGTGCTGATC TCCCAGGACG ACGGCGCCGC CGTGGCCTAC
GCGCTGTGGA AGCTGCAGGA TCGCGGCCGC ATGTTCGTGA AGCCGGGCGA CGCGCTGTAT
GAAGGCATGA TCATCGGCAT CCACAGCCGC GACAACGACC TTGTCGTGAA CCCGATCAAG
GGCAAGCAGC TGACCAACGT GCGCGCGTCG GGTACCGACG AAGCCGTGCG TCTCGTTCCG
CCCATCCAGA TGTCGCTCGA ATACGCGGTC GAATTCATCG ACGACGACGA ACTCGTCGAA
GTGACGCCGC AAAGCATCCG TCTGCGCAAG CGTCACCTGA AGGAGCACGA GCGCCGTCGC
GCAAGCCGCG AAGCAGCGGT CGACTGA
|
|---|
| Protein sequence | MSRALRNIAI IAHVDHGKTT LVDQLLRQSG TFRENQQVAE RVMDSNDIEK ERGITILAKN
CAVQYEGTHI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVEGPMPQTR FVTKKALALG
LKPIVVINKI DRPGARIDWV INQTFDLFDK LGATEDQLDF PIVYASGLNG YAGLDPSVRE
GDMRPLFEAI LEHVPVRPAD PDGPLQLQIT SLDYSTYVGR IGVGRITRGR IKPGQQVVLR
FGPEGEILNR KINQVLSFEG LERVQVAEAE AGDIVLINGI EEVGIGATIC APEAPEALPM
ITVDEPTLTM NFLVNSSPLA GKEGKFVTSR QIRDRLMKEL NHNVALRVKD TGDETVFEVS
GRGELHLTIL VENMRREGYE LAVSRPRVVL HEVDGVKHEP YELLTVDVED THQGGVMEEL
GRRKGEMLDM ASDGRGRTRL EYRIPARGLI GFQGEFMTLT RGTGLMSHVF DEYLPLKEGS
LGERRNGVLI SQDDGAAVAY ALWKLQDRGR MFVKPGDALY EGMIIGIHSR DNDLVVNPIK
GKQLTNVRAS GTDEAVRLVP PIQMSLEYAV EFIDDDELVE VTPQSIRLRK RHLKEHERRR
ASREAAVD
|
|---|
| |