Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1591 |
Symbol | valS |
ID | 6243082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1805086 |
End bp | 1807959 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642593377 |
Product | valyl-tRNA synthetase |
Protein accession | YP_001857819 |
Protein GI | 186476349 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.888773 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAA GCGACAACAC GCTGGCCAAG AGTTTCGAGC CGCAGACGAT CGAGGCCCAA TGGGGCCCCG AATGGGAAAA ACGCGGCTAC GCCGCTCCGA CGATGGAGCC GGGCCGCAAG AATTTCTCGA TCCAGTTGCC GCCGCCCAAC GTCACGGGCA CGCTGCACAT GGGTCATGCG TTCAACCAGA CCATCATGGA CGGCCTGACG CGCTACCACC GCATGCTCGG CGAAAACACG CTGTGGGTAC CGGGCACGGA CCACGCGGGC ATCGCGACGC AGATCGTCGT CGAGCGCCAG CTGGACGCGC AAGGCGTATC GCGCCACGAT CTCGGCCGCG AAAAGTTCGT CGAGCGCGTG TGGGAATGGA AGCAGCAGTC CGGATCGACC ATCACGGGCC AGGTCCGGCG CCTGGGCGCA TCGATCGACT GGTCGCGCGA ATACTTCACG ATGGACGACA AGATGTCGGC CGCCGTGCGC GATGTGTTCG TGCGCCTCTA TGAACAGGGC CTGATTTACC GCGGCAAGCG CCTCGTGAAC TGGGACCCCG TGCTGCTCAC GGCTGTGTCC GATCTCGAAG TGGTCAGCGA GGAAGAAAAC GGCAGCCTGT GGCATATCCA TTACCCGCTC GCGGACGGCT CCGGCTATCT GACCGTCGCG ACGACGCGGC CGGAAACGAT GCTCGGCGAC GTCGCGGTGA TGGTGCATCC GGAAGACGAA CGCTACGCGA AGCTGATCGG CCAGAACGTC AAGCTGCCGC TGACGGACCG TGAAATTCCC ATCATCGCCG ACGACTACGT GGATCGCGAA TTCGGCACGG GCGTCGTGAA GGTCACGCCT GCGCACGACT TCAACGATTA TCAGGTCGGC CAGCGCCATA AGCTGCCGCA GATCGAAATC CTCACGCTCG ACGCGAAGAT CAACGACAAC GCACCCGAAA AGTATCGCGG CATGGATCGC TTCGACGCGC GCAAGCAGGT CGTCGCGGAT CTCGAAGCGA TCGGGCTGCT CGAATCGGTG AAGCCGCACA AGCTGATGGT GCCGCGCGGC GATCGTACAG GCGTGGCGAT CGAGCCGATG CTGACGGACC AGTGGTTCGT CGCGATGAGC AAGCCGGCGC CCGAGGGCAC GTTCAATCCG GGCAAGTCGA TCGCCGAAAC GGCGCTCGAC GTGGTGCGCA ACGGCCAGAT CAAATTCGTG CCAGAGAACT GGACGACCAC GTACTACCAG TGGCTCGAGA ACATCCAGGA CTGGTGTATT TCGCGCCAGC TGTGGTGGGG CCATCAAATC CCCGCGTGGT ACGGCGAAAG CGGCGAGATC TTCGTCGCGA AGACGGAAGA AGAAGCGCGC GCAAAGGCGA ATGCGCAGGG CTACAAGGGC GGCCTGAAGC GCGACGAAGA CGTGCTCGAC ACGTGGTTCT CGTCGGCGCT CGTGCCGTTC TCGTCGCTCG GCTGGCCGGA CCACACTCCC GACCTTAGCG CGTTCCTGCC GTCGTCGGTG CTCGTCACCG GCTTTGACAT CATCTTCTTC TGGGTTGCGC GCATGGTCAT GATGACCACG CACTTCACGG GCAAGGTGCC GTTCGACACG GTCTACGTGC ACGGCCTCGT GCGCGACGCC GAAGGCCAGA AGATGTCGAA GAGCAAGGGC AACACGCTCG ACCCGATCGA CATCGTCGAC GGCATCGGTC TCGACGCGCT GGTCGCGAAG CGCACGACGG GTCTGATGAA TCCGAAGCAG GCTTCGACGA TCGAAAAGAA GACGCGCAAG GAATTCCCGA ACGGCATTCC CGCGTTTGGC ACGGACGCGC TGCGCTTCAC GATGGCGTCG ATGGCTACGC TCGGCCGCAA CGTCAACTTC GACCTTGCGC GCTGCGAGGG TTACCGCAAC TTCTGCAACA AGCTGTGGAA CGCGACACGC TTCGTGCTGA TGAACTGCGA AGGCCACGAC TGCGGTTTCT CGAAGCCGGG TGCGTGCCAG CCGGGCGATT GCGGGCCGGG CGGCTACACG GACTTCTCGC AGGCCGACCG CTGGATCGTG TCCCTGCTTC AGCGCGTCGA ATCCGAAGTC GAAAAGGGCT TTGCCGACTA TCGCTTCGAC AATGTGGCAA ACGCCCTATA CAAGTTCGTA TGGGACGAAT ACTGTGACTG GTATCTCGAA CTGGCGAAGG TGCAGATCCA GACGGGTACG CCGGAGCAGC AGCGCGCGAC GCGCCGCACG CTGTTGCGTG TGCTCGAGGC GGTGCTGCGT CTCGCGCACC CGGTGATTCC TTTCATCACG GAAGCGTTGT GGCAGAAGGT GGCGCCGCTC GCGGCGAAGT ACCCGGCCGG CAAGGCGGAG GGTGAAGCGT CGATCATGAC GCAGCCCTAC CCGATCGCCG AAGCCGGCAA GATCGACGAA TCGGCCGAAC AATGGGCCGC CGATCTGAAA GCCGTGATCG ACGCGTGCCG AAACCTGCGC GGCGAGATGA ACCTGTCGCC GGCGACGAAG GTGCCGCTGC TGGTAACGGG CAATGCGGAG CGTCTCGCGT CGTTCGCACC TTACGCGCAG GCGTTGGCGC GTCTGTCCGA AGTGCAGATC ATCGCGGACG AAGCGACGCT GGATGCACAG GCACATGGCG CGCCGATTGC TATTGTTGGT ACGGACAAGC TCGTGCTGAA AGTGGAAATC GATGTCGCCG CCGAACGCGA GCGACTGTCA AAAGAAATCG CGAGACTGAA CGCAGAAGTT TCGAAATGTA ACGCCAAGCT GCAGAACGAT AGCTTTGTTG CAAAAGCACC GCCGGCGGTC GTTGAGCAGG AGCAAAAAAG GCTGGCAGAA TATCAGACCA CGATTGGCAA GCTGACGGCA CAACTGTCGC GCTTGCCGGC CTGA
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Protein sequence | MTTSDNTLAK SFEPQTIEAQ WGPEWEKRGY AAPTMEPGRK NFSIQLPPPN VTGTLHMGHA FNQTIMDGLT RYHRMLGENT LWVPGTDHAG IATQIVVERQ LDAQGVSRHD LGREKFVERV WEWKQQSGST ITGQVRRLGA SIDWSREYFT MDDKMSAAVR DVFVRLYEQG LIYRGKRLVN WDPVLLTAVS DLEVVSEEEN GSLWHIHYPL ADGSGYLTVA TTRPETMLGD VAVMVHPEDE RYAKLIGQNV KLPLTDREIP IIADDYVDRE FGTGVVKVTP AHDFNDYQVG QRHKLPQIEI LTLDAKINDN APEKYRGMDR FDARKQVVAD LEAIGLLESV KPHKLMVPRG DRTGVAIEPM LTDQWFVAMS KPAPEGTFNP GKSIAETALD VVRNGQIKFV PENWTTTYYQ WLENIQDWCI SRQLWWGHQI PAWYGESGEI FVAKTEEEAR AKANAQGYKG GLKRDEDVLD TWFSSALVPF SSLGWPDHTP DLSAFLPSSV LVTGFDIIFF WVARMVMMTT HFTGKVPFDT VYVHGLVRDA EGQKMSKSKG NTLDPIDIVD GIGLDALVAK RTTGLMNPKQ ASTIEKKTRK EFPNGIPAFG TDALRFTMAS MATLGRNVNF DLARCEGYRN FCNKLWNATR FVLMNCEGHD CGFSKPGACQ PGDCGPGGYT DFSQADRWIV SLLQRVESEV EKGFADYRFD NVANALYKFV WDEYCDWYLE LAKVQIQTGT PEQQRATRRT LLRVLEAVLR LAHPVIPFIT EALWQKVAPL AAKYPAGKAE GEASIMTQPY PIAEAGKIDE SAEQWAADLK AVIDACRNLR GEMNLSPATK VPLLVTGNAE RLASFAPYAQ ALARLSEVQI IADEATLDAQ AHGAPIAIVG TDKLVLKVEI DVAAERERLS KEIARLNAEV SKCNAKLQND SFVAKAPPAV VEQEQKRLAE YQTTIGKLTA QLSRLPA
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