| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1582 |
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| Symbol | |
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| ID | 6243073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1791074 |
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| End bp | 1792621 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642593368 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001857810 |
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| Protein GI | 186476340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGTTTC CGGTAAAAAA AGGGATCGCC GCAGTGTCGG TTCTTACGAT CTCGTTGATA
ATCGCCGGTT GCGCGAGCAC GGGACACATT GCGCCTCAAT CGACGGGCAC GGAACCCGCC
TCGCTCGATG TCGGCGCCGC GATCCGTGCC GCCAATACCG ACGCGCAATG GCCCGCTGCC
GACTGGTGGC GCGCCTATCA CGATCCGCAG CTGAACGCAT GGATCGAGCA GGCGCAGGCG
GGCAGTCCGT CGCTCGCGGC TGCGCAGGCG CGCGTGCGCG AAGCGCAGTC GATCGCCGGC
GTCGCGAAAT CGGCTGAATT GCCGCAAGTC GCCGGCAGCA TGCAGATCCA GCGCAAGCAG
TGGCCGAACA ACGTCTTTTA TGGTCCGGGC GAACTGGCTG GCCAGCAGTC GTGGAACAAC
ACGGCCGAAC TCGGCCTCTC CTATCACCTC GATCTGTGGG GCAAGGACAA GAACGCCACC
GAGGAAGCGC TCGACCTCGC GCACGCGCGC GCCGCCGATT ACCGCGCCGC GCAGCTCGAA
CTCGAAGCGA ACATCGTGCG CGCCTATATC CAGATGTCGC TGAACTACGC GCTGCTCGAC
ATCGCGAAGT CGACGCTCGA GCAGCAGCAA CAGGTCGCGG CGCTCGCGAA CCGGCGGTTG
AAAGGCGGCA TCGGCACGCA GCTGGAAGTC GCGCAGGCGG AAACGCCGCT GCCCGAATAC
GAACGCCAGA TCGACGCAAT CGAGGAATCG ATCGCACTCG GCCGCAATCA GCTGGCGGCA
CTCGCGGGCA AAGGCCCCGG CGCGGGCGAT TCGATCACGC GTCCGCAGCT CGCGCTGTCC
GGTTTCGCGG GACTGCCGTC GAGGATGCCC GCAGAACTGA TCGGCCATCG TCCGGATATC
GTCGCGGCGC GCTGGACGGT CGCGGCGCAA GCGCGCGGCA TCGACGTCGC CAAGGCCGAC
TTCTATCCGA ATATCGATCT GCTCGCGTCC GTCGGCGGCT ATGCGGCGAT GGGGCCGCTG
TTTGGCTTCC TGAAGTCGCA GGCGGGCGGC TGGACGGCGG GCCCGGCGCT GTCGCTGCCC
ATCTTCACGG GCGGACGTCT GCGCGCGCAA CTGGGTGCGG CATCGGCGGG CTATGACGTG
GCCGTCGAGC AATACAACCA GTCGATCGTC AATGCGTTGA AGGAAATCGC CGACGAAGTC
GTGCGGATGC GTTCGCTCGA TACGCAGCTG AACGATGCGC AGCGCTCCGT CGCGACGGCG
AACAAGACCT ATCAGCTGGC ACGCGAAGGG TATCGCCGCG GCTTGACCGA CTATGTGAAC
GTGCTGATCG CGCAGACGCA GCTGCTGCAC GCGCAGGAAG GCGTCGCGAA GGTCCAGGCC
GGACAGCTGC AGGCTCATGC GACGCTCGTG ACGGCGCTGG GCGGCGGCGT GATCGATCCC
GCCGACGGCC CTTCGCAAAA GGATGTGCTG CCCGCGCACG GCAAGGGCAA GGGCTCGAAA
GCGGACGCCT CTGCGACCGC TTCGACGGGC GCGCCCGCCG CTCATTGA
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| Protein sequence | MQFPVKKGIA AVSVLTISLI IAGCASTGHI APQSTGTEPA SLDVGAAIRA ANTDAQWPAA
DWWRAYHDPQ LNAWIEQAQA GSPSLAAAQA RVREAQSIAG VAKSAELPQV AGSMQIQRKQ
WPNNVFYGPG ELAGQQSWNN TAELGLSYHL DLWGKDKNAT EEALDLAHAR AADYRAAQLE
LEANIVRAYI QMSLNYALLD IAKSTLEQQQ QVAALANRRL KGGIGTQLEV AQAETPLPEY
ERQIDAIEES IALGRNQLAA LAGKGPGAGD SITRPQLALS GFAGLPSRMP AELIGHRPDI
VAARWTVAAQ ARGIDVAKAD FYPNIDLLAS VGGYAAMGPL FGFLKSQAGG WTAGPALSLP
IFTGGRLRAQ LGAASAGYDV AVEQYNQSIV NALKEIADEV VRMRSLDTQL NDAQRSVATA
NKTYQLAREG YRRGLTDYVN VLIAQTQLLH AQEGVAKVQA GQLQAHATLV TALGGGVIDP
ADGPSQKDVL PAHGKGKGSK ADASATASTG APAAH
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