| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1487 |
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| Symbol | |
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| ID | 6242978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1678882 |
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| End bp | 1680300 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642593271 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001857715 |
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| Protein GI | 186476245 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures |
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| COG ID | [COG5295] Autotransporter adhesin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.693194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA TGAATGGAAT AATCGCGAAT CAAATCGCGC ACCGGCGTGC CGTATCGAGC
ACCCACCCAC AGCGCTGCCC GACTCAACCG CGGCGGCGCG CGGCTGGGCG GGCACTGGCA
GGCGTATTGC TGATGGTGGC GATGACGGGC GCGCACGCAG CTGTCATTGC AGGCAGTGGC
GCAGTGTCGG TGGACCCGAC GGGCGTGGCA ATCGGCGAGA CCGCGTTCTC GGGCGGCGTC
AATGCAATTG CGCTCGGTGA CACGTCGACG GCCGTCGGCA ACTACACGAC CGCGCTCGGC
GCGCACGCGC GTGCGATGGC GGGCGCGTCG ACAGCGATCG GCGACACCGC ACAGGCGAAC
GCGTTCCAGT CGCTGGCGAT CGGCGCGAAC TCGATGGCGA CGTTCATTAG CATTGCGCTC
GGTTCCGGCT CCGTGACGCT GTTCGGCGCG CAGATCGGCT ACACGGCGTT CGGACTCGGC
GCGCCGCAAA CGTCGTCGGG CGAAGTCAAC GTCGGCAACC GCACGATCAG CAGCATGGCC
CCCGGGCGTG CCGATCAGGA CGCCGTCAAC GTGGCGCAAC TGAAAGCTGT CGCGGGCAAG
CTCGACGGCG ACGTGACCGC GCTGCAGAAG CGGCTCGACG GCGCGGTAAT GTACGACCGC
AATGCCGACG GCTCCGTCAA CCGCGACAGC ATCACGCTGC AGGGCGACCC CGCCGGCGGT
GGCACGCAGC TTCACAACGT CGCGAATGCC GTCGGCAGCC AGGATGCTGT GAACCTCGGC
CAGCTTGGAG CGATGGTCGG CAACGCGGTC AGCAACATCA CCGTCAATAC GGCGAATCCG
ATGTTCAGCG CCGAAGGGGC GCCCGTCAGC GAGCCCGCAC TGGCAACGGG CACGCATTCG
ATCGCGGCGG GCGCGAATGC GCAGGCGAGC GGCACGAACG CCGTCGCGCT GGGCGCAGGT
GCAAACGCGA GCGCAGACAA CGCTGTGGCG CTCGGCCAAG GCTCGGTCGC GGATCGCGCG
AACACGGTCT CCGTCGGTGC TGCAGGACAG GAGCGGCAGA TCGCGAACGT CGCGGCGGGC
GTTCAGGGCA CGGATGCCGT CAACCTGAAC CAGCTGAACC AGAGCATGGG CAACGCGGTC
GGCGAGGCCA AAGCCTATAC CGACGACCAG GTCCGTTCGG CGCGCAAAGA CAGCTATGGC
GGCGCCGCGG CGGCAATCGC AATGGCAGGC CTGCCGCAAG CGGTGCTACC GGGCCGCGGC
ATGGTCGCGC TCGCGGCCGG CACGTACGGC GGCCAGTCGG CGATGGCGCT CGGCGTGTCG
CAATTGTCCG ACTCGGGCAA ATGGGCCTAC AAGCTGCAAG GCACGGCGAG CACACGCGGC
GAGCTTGGTG CGTCGATCGG AGCCGGCATG CACTGGTGA
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| Protein sequence | MKNMNGIIAN QIAHRRAVSS THPQRCPTQP RRRAAGRALA GVLLMVAMTG AHAAVIAGSG
AVSVDPTGVA IGETAFSGGV NAIALGDTST AVGNYTTALG AHARAMAGAS TAIGDTAQAN
AFQSLAIGAN SMATFISIAL GSGSVTLFGA QIGYTAFGLG APQTSSGEVN VGNRTISSMA
PGRADQDAVN VAQLKAVAGK LDGDVTALQK RLDGAVMYDR NADGSVNRDS ITLQGDPAGG
GTQLHNVANA VGSQDAVNLG QLGAMVGNAV SNITVNTANP MFSAEGAPVS EPALATGTHS
IAAGANAQAS GTNAVALGAG ANASADNAVA LGQGSVADRA NTVSVGAAGQ ERQIANVAAG
VQGTDAVNLN QLNQSMGNAV GEAKAYTDDQ VRSARKDSYG GAAAAIAMAG LPQAVLPGRG
MVALAAGTYG GQSAMALGVS QLSDSGKWAY KLQGTASTRG ELGASIGAGM HW
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