Gene Bphy_1394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1394 
Symbol 
ID6242885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1566355 
End bp1567155 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content63% 
IMG OID642593177 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_001857622 
Protein GI186476152 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00501368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCAAG AAACGCCGCT GCGAAGCGTC GCTGCGGGCG TGCCTGGCGA GGGCAAACGC 
CCTCACGCGG CGCGCCCGTT TTTCTTTATC GCCGACCTTC ACCTGAGCGA GGCGATCCCG
CAAACGGTCG CCGCGTTCGA GCATTTCGTC ATGGTGACGG CCGAGCACGC GGATTCCGTC
TTCATTCTCG GCGACCTGTT CGAATACTGG ATCGGCGACG ATATGCTCGC TGAACCCTTC
GCTGCCCGCA TGGCCAAGCT GATGCACACA CTGTCGGAGC GCGGCATCGC GCTCTACATC
ATGCACGGCA ACCGCGACTT CCTCTTGGGC AAACGCTTCA TGAAAGCGGC GGGCGCGATC
TGGCTACCCG ATCCGTTCGT CATTACCGCG TTCGGCACCA AAATCGCGCT CACGCATGGC
GACGCGCAGT GCACGCTGGA CCGCGGCTAC CAGCGCTTTC GCGGCTTTGC GCGCAATCGT
ATCGCGCAGT GGCTGTTTCT GGCATGGCCG TATCGCTGGC GCAAGGCGCT GGCCGAAAAG
ATGCGCAGAA CGAGCGAAGC CGGACGTGCA CGCCCGGTGA CGCCGCGCTA TGACGTGACG
TCGGAAGGCG TCGCTGCGCT CTTCAAGAAG ACGAAGACGG CTACGATGAT TCACGGTCAT
ACGCACCGGC CCGCGCTGCA TCACGAGAAA GGCGGCATGC GCTGGGTACT GCCCGATTGG
GATCTCGACC ACGGCGAGCG CCGGGGCGGT TACGTGCGTA TCGATTCCGA GGGGATCAAG
GCGCTGCGGC TCGACAAATA G
 
Protein sequence
MLQETPLRSV AAGVPGEGKR PHAARPFFFI ADLHLSEAIP QTVAAFEHFV MVTAEHADSV 
FILGDLFEYW IGDDMLAEPF AARMAKLMHT LSERGIALYI MHGNRDFLLG KRFMKAAGAI
WLPDPFVITA FGTKIALTHG DAQCTLDRGY QRFRGFARNR IAQWLFLAWP YRWRKALAEK
MRRTSEAGRA RPVTPRYDVT SEGVAALFKK TKTATMIHGH THRPALHHEK GGMRWVLPDW
DLDHGERRGG YVRIDSEGIK ALRLDK