| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1363 |
|---|
| Symbol | |
|---|
| ID | 6242854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1531024 |
|---|
| End bp | 1532049 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642593140 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_001857591 |
|---|
| Protein GI | 186476121 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.948234 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGC ATGAATCCGC GCTGGAAGAA CTCGGTCTCG CGCCGATGTG GGTGCGCCGG
GCGGGCGCAC CTGACGCGGC AGTCGACGCG CAAGCGTCGC ATGGCGATGG CGAAGTCGCG
GCGAACGTAG CACGGGCCGC GCCCGTTGCA TCGACTGCCG ATGCCCAACG GCCTGGCGAC
GACGCGGCGG TGTCGGGCGA AGCGCAATCG GATTCCCGCT TTTCGAACGC AACAAGCGAG
CCGGCCGCCA GCCCTGAAAG CGCACGTGCG GAAGTCGAAG CCGCACCGGG AGGCGCACGT
CAGTCGCGCC GCGCATCGCC GCCGCCCGCA CCCGACGAAG CACCGCCTTT CCCCGACGAC
GATTTCGCGT GGTTCGACGA TCTCCCTGCC GGACCGCCGT CAGATCTCGA AGCGAATACG
AGCGAGCCGG TGCAGCCGGG CATCGACACG CTTGACTGGG CCGCACTCGA AGCTCGCGTA
TCGGCTTGCG AGCGTTGCCG TCTGTGCGAG CGGCGCACGA ACACCGTATT CGGCGTCGGC
GATCGCGAAG CCGACTGGAT GCTGATCGGC GAAGCACCCG GAGAGAACGA GGACAAGCAG
GGCGAACCGT TCGTCGGTCA GGCGGGCAAG CTGCTCGACA ACATGCTGCG CTCGCTTGGT
CTTGCACGCG GCACGAATGT GTATATCGCG AACGTGATCA AGTGCCGACC GCCCGGAAAC
CGCAATCCGG AACGGGACGA AGTGGCGCGC TGCGAGCCTT ATCTGCAGCG CCAGGTCGCG
CTCGTGAAGC CGAAGCTGAT TATTGCGCTC GGCCGCTTCG CTGCGCAGAG CCTGCTGAAG
ACGGAAGCCA GCATTTCGTC GCTGCGCGGA CGCGTGTACG AGTACGAAGG CGTGCCTGTC
GTCGTCACCT ACCATCCCGC GTATCTGCTG CGCAGCCTCG GCGACAAGGC GAAGTCGTGG
CAGGACCTGT GTCTCGCTCG CGATATGTGG CACAAGGCGA GTACAGAAGG GGATGCTGCG
ACATGA
|
|---|
| Protein sequence | MALHESALEE LGLAPMWVRR AGAPDAAVDA QASHGDGEVA ANVARAAPVA STADAQRPGD
DAAVSGEAQS DSRFSNATSE PAASPESARA EVEAAPGGAR QSRRASPPPA PDEAPPFPDD
DFAWFDDLPA GPPSDLEANT SEPVQPGIDT LDWAALEARV SACERCRLCE RRTNTVFGVG
DREADWMLIG EAPGENEDKQ GEPFVGQAGK LLDNMLRSLG LARGTNVYIA NVIKCRPPGN
RNPERDEVAR CEPYLQRQVA LVKPKLIIAL GRFAAQSLLK TEASISSLRG RVYEYEGVPV
VVTYHPAYLL RSLGDKAKSW QDLCLARDMW HKASTEGDAA T
|
|---|
| |