| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1343 |
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| Symbol | |
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| ID | 6242834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 1504744 |
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| End bp | 1506795 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642593120 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001857571 |
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| Protein GI | 186476101 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.584756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.20338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAA CCCAAGTCCC TGATCCTGCA ACCAGTGCAC CTGCCGAGCG GGCGTTGTGG
CTGCGCGACG AACTCGAGCG CGCGAATTAC GCGTACTACG TGCTCGACCA GCCGGACTTG
CCCGACGCGG AATACGACAG GCTGTTCAAG GAACTGCAGC AGATCGAAAG CGAGCATCCC
GACCTGATCA CGCCGGATTC GCCGACGCAG CGCGTCGGCG GCGAAGTGGC AAGCGGCTTT
CGGCCCGTCG TGCACGACAT GCCGATGCTG TCGCTGAACA ACGGCTTCTC GGACGAAGAC
ATCGCTGCCT TCGACAAGCG CGTGTCCGAC ACGCTGCACC ACACGCCCGT CGACTACGCG
TGCGAACTGA AATTCGACGG ACTGGCCATT TCGCTGCGCT ACGTGGATGG CCAGTTCACC
CAGGCAGCGA CGCGCGGTGA CGGCGCGACG GGCGAAGACG TGACGGAGAA CGTGCGCACC
ATTCGCTCGA TTCCCCTGAA GCTCAAGGGC AAGCGCGTGC CGAAACTGGT CGACGTGCGC
GGCGAAGTGC TGATGTTCAG GCGCGATTTC GACAAGCTGA ACCAGCGTCA GCGCGACGCG
GGCCAGCGGG AGTTCGCCAA CCCGCGCAAT GCAGCAGCGG GCAGCTTGCG CCAGCTCGAT
CCGAAGATGA CGGCGCAGCG TCCGTTGTCG TTCTTTGCAT ACGGCATCGG TGTGCTCGAC
GGCATCGAGA TGCCTGGCAC GCACAGCGAA CTGCTCGACT GGTATCACGA AATGGGCTTG
CCCGTGAACA GCGAGCGCGC CGTGGTGCAG GGCGCCGAAG GCGTGCTCGG TTTCTTCCAT
AAGGTTGGCG AGAAACGCGA CAAGCTGCCG TACGACATCG ACGGCGTCGT CTACAAGGTG
AACCGCCGCG ACGAGCAGGA CGCGCTGGGT TTCGTGTCGC GCGCGCCACG TTTCGCGCTC
GCGCACAAGT TTCCCGCGCA GGAAGCACTG ACAAAGCTGA TCGCCATCGA CGTGCAGGTC
GGCAGAACGG GCGCGATTAC GCCTGTCGCG CGGCTCGAGC CCGTGTTCGT CGGCGGTGCG
ACCGTGACGA ATGCAACTCT GCATAACGAG GACGAAGTGC GCCGCAAGGA CATCCGCATC
GGCGACACCG TCATCGTGCG GCGCGCGGGC GACGTGATTC CAGAGGTGGT CGGCGCGCTG
CTCGAACGGC GTCCCCCCGA CGCCCGCGAG TTCGTGATGC CGACGCAATG TCCCGTATGC
GGCTCCGCGA TCGAACGGCT GCCCGACGAG GCGATCGCGC GCTGTTCGGG CGGCCTGTTT
TGCCCGGCGC AGCGCAAGCA GGCGCTGTGG CATTTCGCGC AGCGTCGCGC ACTGGACATT
GACGGACTCG GCGAAAAAAT CATCGATCAG CTTGTTGAAC TCAATCTGGT GCGCACGCCC
GCCGATCTCT TCAATCTGGG CTTCGCGACA CTCGCCGAAC TCGACCGCTT CGCCGAGAAG
TCCGCGCAGA ACCTCATCGA CTCGCTGGAG AAGGCCAAGC ACACAACGCT GGCGCGCTTC
ATCTATGCGC TGGGTATCCG GCATGTCGGC GAATCGACGG CGAAAGATCT GGCCAGGCAC
TTCGGCTCGC TCGATCCCAT CATGAGCGCG ACCGTCGAAG AACTGCTCGA AGTCAACGAC
GTCGGCCCTA TCGTCGCGGA GGCGATCCAT CAGTTTTTCG CCGAAGAGCA CAACCGCACC
GTGATCGAAC AGCTGCGCGC GCCTGGCAAA GTCACCTGGG CGGAAGGTCC ACCCGCGCCG
AAAGCGCCGC AGGGTGTGTT GGCGGGCAAG ACGGTCGTGC TGACAGGCAC GCTGCCCAAC
ATGGGCCGTG ACGAGGCGAA AGAGTTGCTG GAGGCGGCCG GTGCGAAGGT GGCCGGTTCG
GTGTCGAAGA AGACCGATTA CGTGGTGGCC GGTGCGGAAG CGGGGAGCAA GCTCGCGAAA
GCCGAGGAAC TTGGCATCCC CGTGCTCGAC GAAGATGGTA TGCGTAAGCT CCTGGAGGGG
CAAACAACAT GA
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| Protein sequence | MARTQVPDPA TSAPAERALW LRDELERANY AYYVLDQPDL PDAEYDRLFK ELQQIESEHP
DLITPDSPTQ RVGGEVASGF RPVVHDMPML SLNNGFSDED IAAFDKRVSD TLHHTPVDYA
CELKFDGLAI SLRYVDGQFT QAATRGDGAT GEDVTENVRT IRSIPLKLKG KRVPKLVDVR
GEVLMFRRDF DKLNQRQRDA GQREFANPRN AAAGSLRQLD PKMTAQRPLS FFAYGIGVLD
GIEMPGTHSE LLDWYHEMGL PVNSERAVVQ GAEGVLGFFH KVGEKRDKLP YDIDGVVYKV
NRRDEQDALG FVSRAPRFAL AHKFPAQEAL TKLIAIDVQV GRTGAITPVA RLEPVFVGGA
TVTNATLHNE DEVRRKDIRI GDTVIVRRAG DVIPEVVGAL LERRPPDARE FVMPTQCPVC
GSAIERLPDE AIARCSGGLF CPAQRKQALW HFAQRRALDI DGLGEKIIDQ LVELNLVRTP
ADLFNLGFAT LAELDRFAEK SAQNLIDSLE KAKHTTLARF IYALGIRHVG ESTAKDLARH
FGSLDPIMSA TVEELLEVND VGPIVAEAIH QFFAEEHNRT VIEQLRAPGK VTWAEGPPAP
KAPQGVLAGK TVVLTGTLPN MGRDEAKELL EAAGAKVAGS VSKKTDYVVA GAEAGSKLAK
AEELGIPVLD EDGMRKLLEG QTT
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