Gene Bphy_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1083 
Symbol 
ID6242581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1220856 
End bp1221512 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content64% 
IMG OID642592862 
ProductProQ activator of osmoprotectant transporter ProP 
Protein accessionYP_001857318 
Protein GI186475848 
COG category[T] Signal transduction mechanisms 
COG ID[COG3109] Activator of osmoprotectant transporter ProP 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.316568 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCTTTG AACAACTGGC GAAGCTGAGG GACGAACTCG CCAAGCAGGC AAAAGCGCAG 
CGCAAGGAAA AGCAGGCTGC GGACACGCAC GCTGCCCAAC CGGGCAAGAA CGCGAAGGCA
AACGACTCGA CAAAGGGCAG AGACGCTCGC ACAGCGGGCA AGCCAGCTGC GAAGCCGGAC
CGGAAGCCGG CACCCGCACG TCAGGCACCG AAGCAGCAGA ATCCCGTCGA TCCGGTCGTC
CATACCATCG GCAGGTTGCA AAAGCGGTAT CCGCTGGCGT TTCCGAAGAA TCCTGCGCCG
AAGGTGGCGC TGAAGATCGG CATTCTCGAC GATCTGCTCG CACAGGCGGG CGAACTCAAG
CTGTCCGAGC AGGAAGTTCG CGATGCCGTG AGTACCTGGT GCCGCGGCAG CCGCTACTGG
GCGAGCCTGA CGGAAGGTGC ATCGCGTGTC GATTTGACGG GCGCGGAAAC GGGCAAGGTC
ACGGCGTCGG AATCCGCATT TGCGCGACGT CGTTCGGGCG GACGGACGAA GCCGGTGACA
ACCAAGGCAG GCGAGAATGC GCCTGCTGTG GCAAAGCCCG CTGATGAAGC GGCGGCTGCG
CCAGGTGCGA GTAACGATGC AGACAGTGCG CCGGCCGCGG ATAAGGCGCG AGGCTGA
 
Protein sequence
MGFEQLAKLR DELAKQAKAQ RKEKQAADTH AAQPGKNAKA NDSTKGRDAR TAGKPAAKPD 
RKPAPARQAP KQQNPVDPVV HTIGRLQKRY PLAFPKNPAP KVALKIGILD DLLAQAGELK
LSEQEVRDAV STWCRGSRYW ASLTEGASRV DLTGAETGKV TASESAFARR RSGGRTKPVT
TKAGENAPAV AKPADEAAAA PGASNDADSA PAADKARG