Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1060 |
Symbol | |
ID | 6242558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 1190212 |
End bp | 1191393 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642592839 |
Product | polysaccharide export protein |
Protein accession | YP_001857295 |
Protein GI | 186475825 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAC GACACATCAC GATATCTCTT GCGCTGACGA CTTTTCTGTC GGCATGCGCG ACCGCGCCGG GGAACTACCT CGACACGTCG CGCCTGAAGG AAGACCAGCA GAACAAGCCT GCTGAGACGT ACCCGGTCAC GCTGATCGAT GCCTCCGTCA TCCAGAAGCA GCAGGCACAA ACGGCGGACG CGATCGCGCA TCAGGTGCTG CCGCCGCCGG GTCCGTTTGC CGATCCGACC CAGTACGTCT ATCGCATCGC GCCACAGGAC ATTCTCGGCA TCACCGTGTG GGACCACCCG GAACTGACGA CGCCGAACGG CAGCACGCTG TCCTCGGGCG GCAACACCAC GCAGACGCTC GGCGGCGCGT TGCAGCAGCC GTACACGCAG GCACTGCCTG GCCAGGCCGA TCCGTATGGG CAGACGGTCG CGCCCGACGG CACGATCTAT TTCCCATTCG TCGGCCGAAT CCGCGCGTCG GGGCGGACGA CGGCGCAAAT CCGCGACGAG CTGTCGAAGA AGCTCGTGCC GTACATCCGT GACCCGCAAG TCGACGTGCG CGTGCTGTCT TACCGCAGTC AGAAGGTGCA GGTGACGGGC GACGTGAAGA CGCCGGGCCC GCTCGCGCTG TCCGATGTGC CGCTCACGCT GGTCGACGCG ATCACCCGCT CGGGCGGCTC GACGGACAAC GCGGATCTGC AGCGCGTGCG TCTCACGCGC AAGGGCAAGC TCTATGTGCT CGACGCGAAC CGCATGCTCG ACAAGGGCGA CGCGACGCAG AACGTGATGC TCGAACCGGG CGACATCGTC AACGTGCCGG ACCGCAGCGA CACGCGCATC TTCGTGATGG GCGAAGTGAA AACGCCGATC CCCGTGCCGA TGAACAAGGG CGAGCTGACC ATCGCCGATG CGCTCACGCA GGCGGGCGGC ATTCTCGACA CCGACGCCAA CCCGCGCCAG ATCTACGTGA TGCGCGGCAT GAAGGACAAG CCGACCACGC CAGACGTGTA TCGCCTCGAC ATGACGCAGC CCGACGCGAT CATGCTGTCG TCGCAATTCG AACTGCAGCC GATGGACGTG GTGTACGTCG GCACGGCCGC CTCGACGACG TTCAACCGCG TGTTGCAGCA GGTGCTGCCG ACGGTGCAGA CGCTGTTCTA TCTGAAGCAG TTGACGCGCT GA
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Protein sequence | MLKRHITISL ALTTFLSACA TAPGNYLDTS RLKEDQQNKP AETYPVTLID ASVIQKQQAQ TADAIAHQVL PPPGPFADPT QYVYRIAPQD ILGITVWDHP ELTTPNGSTL SSGGNTTQTL GGALQQPYTQ ALPGQADPYG QTVAPDGTIY FPFVGRIRAS GRTTAQIRDE LSKKLVPYIR DPQVDVRVLS YRSQKVQVTG DVKTPGPLAL SDVPLTLVDA ITRSGGSTDN ADLQRVRLTR KGKLYVLDAN RMLDKGDATQ NVMLEPGDIV NVPDRSDTRI FVMGEVKTPI PVPMNKGELT IADALTQAGG ILDTDANPRQ IYVMRGMKDK PTTPDVYRLD MTQPDAIMLS SQFELQPMDV VYVGTAASTT FNRVLQQVLP TVQTLFYLKQ LTR
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