Gene Bphy_1002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1002 
Symbol 
ID6242500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1123538 
End bp1124887 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content63% 
IMG OID642592778 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001857237 
Protein GI186475767 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.101119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.458284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG ACCGGCGCCT ACTGACGCTC GCATTCGGCG GTCTGTTCTG GCGAACGTTC 
CTGCTGATCG CGCTCCTGAT CGCGGTCAGT CTCGCCGCAT GGTTTCAGAG CTTCCGGGTG
ATCGAGCGCG AGCCGCGCGC GCAGCGTGTC GCGCTGCAAC TCGTCGCGAT CGTGAAGCTC
ACGCGCACCG CACTCCTCTA TTCCGATCCC GACCTGCGGC GCGCGCTGCT GCAGGACCTG
GAAAGCAACG AAGGCGTGCG CGTGTACCCG CGCGAAACCA CTGACAAATA CAAACTTCAG
CCCGACGAAT CGCTCAATCG TTTGATCGAG CATGACATAC GCGGGCGTCT CGGCGACGAC
ACCATCATCG CGCAGTCGGT CAACGACATT CCCGGCGTAT GGATCAGCTT CAAGATCGAC
GACGATGACT ACTGGGTCGC GCTCGACCGC GATCAACTCG ACAGTGTGAC GGGCCTGCAA
TGGGCCGGCT GGGGTATTTT TGCGCTGGCG CTGTCGCTGT TCGGCGCAGC GTTCATCACG
AGCCTGGTGA ACCGGCCGTT CGCGCGCCTC GCGATGGCCG CGCGCAAAGT CGGTTCTGGT
CAGGCGCCCG AGAAATTGCC CGAACGCGGC ATGGGCGTTG CCGCCGAAAC CAACCGAAGC
TTCAACCAGA TGGTGCAGGA TCTCGAGCAG CTCGATGCGG ACCGAGCGTT GATGCTCGCG
GGCATTTCGC ACGATCTGCG CACGCCGCTT GCCCGCCTGC GTCTGGAAAC GGAAATGAGT
CCGTCGGACC AGGCGACCAA GGACGCGATG ATCGACGACA TCGAACAGAT GGACATGATC
ATCGGGCGCT TCCTCGATTA CGCGCGTCCG GTACAGAGAA ATCCGGAACC TGTCGACCTT
TCAGTGATCG CAGGAGAACT GGCTGCGCGC ATGTCGAGCG AAGACGGCAT GCGGCTGGTC
ACGCGGCTTG CTCCATCTGC AGTGATCGAG GCAGACGAAA CGGATATCCG GCGCGTCGTC
GGCAATCTGA TCGAGAACGC GCGCAAGTAC GGCTTGTCCG AGGCCGACGG CATTCCGCAT
GTCATCCTGG AAACGCGCGT GTCGCATTCG CGCGTCGAGC TGTCGGTGGT CGACGAAGGT
CCCGGCATTC CGGAAGACCA GCTTCCGCTC GTCACGCGCC CGTTTTATCG CGTGAATTCG
GCGCGCACGC AGGCGAACGG CACCGGGCTC GGCATGGCGA TCGTGCAGCG GCTCGTCGGG
CGTTATCGCG GCGCGCTCCG TCTGCGCAAC CGCACACCGC TGCCCGGCCT GGAAGTGACG
ATCGAGTTTC CACTGGCGAA GAGCATCTGA
 
Protein sequence
MRIDRRLLTL AFGGLFWRTF LLIALLIAVS LAAWFQSFRV IEREPRAQRV ALQLVAIVKL 
TRTALLYSDP DLRRALLQDL ESNEGVRVYP RETTDKYKLQ PDESLNRLIE HDIRGRLGDD
TIIAQSVNDI PGVWISFKID DDDYWVALDR DQLDSVTGLQ WAGWGIFALA LSLFGAAFIT
SLVNRPFARL AMAARKVGSG QAPEKLPERG MGVAAETNRS FNQMVQDLEQ LDADRALMLA
GISHDLRTPL ARLRLETEMS PSDQATKDAM IDDIEQMDMI IGRFLDYARP VQRNPEPVDL
SVIAGELAAR MSSEDGMRLV TRLAPSAVIE ADETDIRRVV GNLIENARKY GLSEADGIPH
VILETRVSHS RVELSVVDEG PGIPEDQLPL VTRPFYRVNS ARTQANGTGL GMAIVQRLVG
RYRGALRLRN RTPLPGLEVT IEFPLAKSI