| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0998 |
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| Symbol | ispD |
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| ID | 6242496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 1120787 |
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| End bp | 1121497 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642592774 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001857233 |
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| Protein GI | 186475763 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTTCCC GCCTCTTTGC ACTGATTCCC TGCGCCGGCA CCGGCAGCCG TTCGGGCGCT
CCGATGCCCA AGCAATATCG CACCGTCGCG GGCCGCGACA TGCTGCATTA TTCGCTGGCC
GCGTTCGACG CCTGCAGCGA GTTCGCGCAG ACGCTCGTCG TGATCGCGCC CGACGACCAG
CACTTCGACG CGCGCCGCTT TGGCGGCCTG CGCTTTGCCG TGCAACGCTG CGGCGGCGCA
TCGCGGCAGG CGTCGGTGCT CAACGGTCTG CACGCGCTCG CCGGCTTTGG TGCACACGAC
GACGACTGGG TGCTCGTGCA CGACGCGGCG CGGCCCGGCA TCACGCCCGC GCTGATACGC
GCGCTGGTCG GCGCGCTGAA GGACGACGCC GTGGGCGGCA TCATGGCGTT GCCCGTGGCC
GACACGCTCA AGCGCGTGGC GCCCGGCACC GACAACCGCA TCGATCACAC CGAACCGCGC
GACGGCCTGT GGCAGGCGCA AACGCCGCAG ATGTTCCGCA TCGGCATGTT GCGCGACGCG
ATTCTGCGCG CGCAAAGCGA CGGGCACGAT CTCACCGACG AAGCCAGCGC CATCGAATGG
AGCGGGCACG CACCCAGACT GGTTCAGGGC AGCTTGCGCA ATTTCAAGGT TACCTATCCG
GAAGACTTCG ATCTGGCCGA AGCTATCCTC GGACGCGGCG CGGCGGGCTG A
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| Protein sequence | MTSRLFALIP CAGTGSRSGA PMPKQYRTVA GRDMLHYSLA AFDACSEFAQ TLVVIAPDDQ
HFDARRFGGL RFAVQRCGGA SRQASVLNGL HALAGFGAHD DDWVLVHDAA RPGITPALIR
ALVGALKDDA VGGIMALPVA DTLKRVAPGT DNRIDHTEPR DGLWQAQTPQ MFRIGMLRDA
ILRAQSDGHD LTDEASAIEW SGHAPRLVQG SLRNFKVTYP EDFDLAEAIL GRGAAG
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