Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_0879 |
Symbol | |
ID | 6242377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 981969 |
End bp | 983858 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642592653 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001857114 |
Protein GI | 186475644 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.200568 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0679699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAACA ACATGTTTTC GAAAGCAGCA GTGTGGCTGG TTATCGCACT GGTGCTGTTT ACGGTGTTCA AGCAGTTCGA CAAGCCCCGT GTCCAGGAAG GCGTTTCGTA TTCGCAGTTC ATGGATGACG CGAAGAGCGG CAAGGTCAAG AGCGTGATCG TCCAGGGTCG CAACCTTACG GTGACACCCG CCGACGGTCA GAAGTATCAA ATCGTGTCGC CGGGCGACAT CTGGATGGTC GGCGACCTGA TGAAGTATGG CGTCCAGGTA AGCGGCAAGG CTGACGACGA ACCGAATGCG CTGGTATCCG CGCTGTACTA CCTCGGGCCA ACCATCCTGA TCATCGGATT CTGGTTCTAC ATGATGAGGC AGATGCAGGG AGGCGGGAAA GGCGGTGCCT TCTCGTTCGG CAAATCCCGC GCACGTCTGA TCGACGAGAA CAACAACGCG ATCAATTTCT CGGATGTCGC GGGCTGCGAT GAGGCGAAAG AAGAGGTGTC CGAACTGGTC GACTTCCTGC GCGATCCGCA GAAGTTCCAG AAGCTGGGCG GCCGGATTCC GCGCGGTGTG CTTCTGGTCG GCCCGCCGGG AACCGGTAAG ACGCTGCTTG CGCGCGCGAT TGCAGGTGAA GCGAAAGTGC CGTTCTTCAG TATCTCGGGT TCGGACTTCG TCGAAATGTT CGTCGGCGTG GGCGCGGCTC GGGTGCGCGA CATGTTCGAA CAGGCAAAGA AACATGCGCC TTGCATCGTG TTCATCGATG AAATCGACGC GGTCGGCCGT CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGTG AGCAGACGCT GAACCAGATG CTCGTCGAAA TGGACGGTTT CGAGGCGAAC TCCGGTGTGA TCGTGATCGC TGCGACGAAC CGTTCGGACG TGCTGGACAA GGCGCTGCTG CGTCCGGGCC GTTTCGACCG TCAGGTGTAC GTCGGTCTGC CCGACATCCG CGGCCGCGAG CACATCATGA AGGTACACCT GCGCAAGGTG CCGATCGCGA ACGACGTCGA CGCAGCAGTG ATTGCGCGCG GCACGCCGGG CTTCTCGGGC GCGGACCTCG CGAACCTTGT GAATGAAGCC GCGCTGTTTG CAGCACGCCG CGGCAAGCGC ATTGTCGAAA TGCAGGACTT CGAAGACGCG AAGGACAAGA TCTTCATGGG TCCGGAGCGT AAGTCGGCTG TGATCCGCGA AGACGCGAAG CGCGCGACGG CTTATCACGA GTCGGGTCAC GCGGTGATCG CCAAGCTTCT GCCGAAGGCC GACCCGGTGC ACAAGGTCAC GATCATTCCG CGTGGCCGTG CGCTGGGTGT GACGTGGCAG CTGCCGGAGC ACGACAACGA GACGTACTCG AAGGACTATC TGCTTGACCG ACTGGCTATC CTGTTCGGCG GCCGGGTGGC GGAAGAACTT TTCCTGAACC TGATCAGCAC GGGCGCTTCG GACGACTTCA ACAAGGCGAC GTCCACGGCG CGCGCCATGG TTGCCCGCTT CGGCATGACG GACGCATTGG GGCCGATGGT CTACGTCGAC GACGAGAACG ATCAGTCGCC ATTCGGACGT GGCTTCACGC GCACGATTTC GGAAGCGACG CAGCAGAAGG TGGATGCCGA AATCCGCCGT GTGCTGGATG AGCAGTACAG CCTCGCGAAG CGTCTGCTCG ACGAGAACCG CGACAAGGTC GAGGCAATGA CTGCCGCGCT GATGGAGTGG GAAACGATCG ACGCCGATCA GATTAACGAC ATCATGGCGG GCCGCCCGCC GCGCTCGCCG AAGAGCACCC CGTCGCCGGG CGATGCTTCG GGCGGCAGCA GCCCCGGCAC GGAAGTCAAG CCGGGCAGCG CGACCGCGCC GGCTACCTGA
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Protein sequence | MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKSGKVK SVIVQGRNLT VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LVSALYYLGP TILIIGFWFY MMRQMQGGGK GGAFSFGKSR ARLIDENNNA INFSDVAGCD EAKEEVSELV DFLRDPQKFQ KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN RSDVLDKALL RPGRFDRQVY VGLPDIRGRE HIMKVHLRKV PIANDVDAAV IARGTPGFSG ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREDAK RATAYHESGH AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL FLNLISTGAS DDFNKATSTA RAMVARFGMT DALGPMVYVD DENDQSPFGR GFTRTISEAT QQKVDAEIRR VLDEQYSLAK RLLDENRDKV EAMTAALMEW ETIDADQIND IMAGRPPRSP KSTPSPGDAS GGSSPGTEVK PGSATAPAT
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