Gene Bphy_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_0879 
Symbol 
ID6242377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp981969 
End bp983858 
Gene Length1890 bp 
Protein Length629 aa 
Translation table11 
GC content62% 
IMG OID642592653 
ProductATP-dependent metalloprotease FtsH 
Protein accessionYP_001857114 
Protein GI186475644 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.200568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0679699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAACAACA ACATGTTTTC GAAAGCAGCA GTGTGGCTGG TTATCGCACT GGTGCTGTTT 
ACGGTGTTCA AGCAGTTCGA CAAGCCCCGT GTCCAGGAAG GCGTTTCGTA TTCGCAGTTC
ATGGATGACG CGAAGAGCGG CAAGGTCAAG AGCGTGATCG TCCAGGGTCG CAACCTTACG
GTGACACCCG CCGACGGTCA GAAGTATCAA ATCGTGTCGC CGGGCGACAT CTGGATGGTC
GGCGACCTGA TGAAGTATGG CGTCCAGGTA AGCGGCAAGG CTGACGACGA ACCGAATGCG
CTGGTATCCG CGCTGTACTA CCTCGGGCCA ACCATCCTGA TCATCGGATT CTGGTTCTAC
ATGATGAGGC AGATGCAGGG AGGCGGGAAA GGCGGTGCCT TCTCGTTCGG CAAATCCCGC
GCACGTCTGA TCGACGAGAA CAACAACGCG ATCAATTTCT CGGATGTCGC GGGCTGCGAT
GAGGCGAAAG AAGAGGTGTC CGAACTGGTC GACTTCCTGC GCGATCCGCA GAAGTTCCAG
AAGCTGGGCG GCCGGATTCC GCGCGGTGTG CTTCTGGTCG GCCCGCCGGG AACCGGTAAG
ACGCTGCTTG CGCGCGCGAT TGCAGGTGAA GCGAAAGTGC CGTTCTTCAG TATCTCGGGT
TCGGACTTCG TCGAAATGTT CGTCGGCGTG GGCGCGGCTC GGGTGCGCGA CATGTTCGAA
CAGGCAAAGA AACATGCGCC TTGCATCGTG TTCATCGATG AAATCGACGC GGTCGGCCGT
CATCGCGGCG CCGGCATGGG CGGCGGCAAC GACGAGCGTG AGCAGACGCT GAACCAGATG
CTCGTCGAAA TGGACGGTTT CGAGGCGAAC TCCGGTGTGA TCGTGATCGC TGCGACGAAC
CGTTCGGACG TGCTGGACAA GGCGCTGCTG CGTCCGGGCC GTTTCGACCG TCAGGTGTAC
GTCGGTCTGC CCGACATCCG CGGCCGCGAG CACATCATGA AGGTACACCT GCGCAAGGTG
CCGATCGCGA ACGACGTCGA CGCAGCAGTG ATTGCGCGCG GCACGCCGGG CTTCTCGGGC
GCGGACCTCG CGAACCTTGT GAATGAAGCC GCGCTGTTTG CAGCACGCCG CGGCAAGCGC
ATTGTCGAAA TGCAGGACTT CGAAGACGCG AAGGACAAGA TCTTCATGGG TCCGGAGCGT
AAGTCGGCTG TGATCCGCGA AGACGCGAAG CGCGCGACGG CTTATCACGA GTCGGGTCAC
GCGGTGATCG CCAAGCTTCT GCCGAAGGCC GACCCGGTGC ACAAGGTCAC GATCATTCCG
CGTGGCCGTG CGCTGGGTGT GACGTGGCAG CTGCCGGAGC ACGACAACGA GACGTACTCG
AAGGACTATC TGCTTGACCG ACTGGCTATC CTGTTCGGCG GCCGGGTGGC GGAAGAACTT
TTCCTGAACC TGATCAGCAC GGGCGCTTCG GACGACTTCA ACAAGGCGAC GTCCACGGCG
CGCGCCATGG TTGCCCGCTT CGGCATGACG GACGCATTGG GGCCGATGGT CTACGTCGAC
GACGAGAACG ATCAGTCGCC ATTCGGACGT GGCTTCACGC GCACGATTTC GGAAGCGACG
CAGCAGAAGG TGGATGCCGA AATCCGCCGT GTGCTGGATG AGCAGTACAG CCTCGCGAAG
CGTCTGCTCG ACGAGAACCG CGACAAGGTC GAGGCAATGA CTGCCGCGCT GATGGAGTGG
GAAACGATCG ACGCCGATCA GATTAACGAC ATCATGGCGG GCCGCCCGCC GCGCTCGCCG
AAGAGCACCC CGTCGCCGGG CGATGCTTCG GGCGGCAGCA GCCCCGGCAC GGAAGTCAAG
CCGGGCAGCG CGACCGCGCC GGCTACCTGA
 
Protein sequence
MNNNMFSKAA VWLVIALVLF TVFKQFDKPR VQEGVSYSQF MDDAKSGKVK SVIVQGRNLT 
VTPADGQKYQ IVSPGDIWMV GDLMKYGVQV SGKADDEPNA LVSALYYLGP TILIIGFWFY
MMRQMQGGGK GGAFSFGKSR ARLIDENNNA INFSDVAGCD EAKEEVSELV DFLRDPQKFQ
KLGGRIPRGV LLVGPPGTGK TLLARAIAGE AKVPFFSISG SDFVEMFVGV GAARVRDMFE
QAKKHAPCIV FIDEIDAVGR HRGAGMGGGN DEREQTLNQM LVEMDGFEAN SGVIVIAATN
RSDVLDKALL RPGRFDRQVY VGLPDIRGRE HIMKVHLRKV PIANDVDAAV IARGTPGFSG
ADLANLVNEA ALFAARRGKR IVEMQDFEDA KDKIFMGPER KSAVIREDAK RATAYHESGH
AVIAKLLPKA DPVHKVTIIP RGRALGVTWQ LPEHDNETYS KDYLLDRLAI LFGGRVAEEL
FLNLISTGAS DDFNKATSTA RAMVARFGMT DALGPMVYVD DENDQSPFGR GFTRTISEAT
QQKVDAEIRR VLDEQYSLAK RLLDENRDKV EAMTAALMEW ETIDADQIND IMAGRPPRSP
KSTPSPGDAS GGSSPGTEVK PGSATAPAT