| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_0874 |
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| Symbol | carB |
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| ID | 6242372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 975730 |
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| End bp | 978984 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642592648 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001857109 |
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| Protein GI | 186475639 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.176638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC GGACAGACAT CAAGAGCATT CTCATCATCG GCGCGGGTCC GATCATCATC
GGCCAGGCGT GCGAGTTCGA TTACTCGGGC GCGCAGGCGT GCAAGGCGCT GCGTGAGGAA
GGCTACAAGG TTATCCTCGT CAACAGCAAT CCGGCGACGA TCATGACCGA CCCGAACACG
GCCGAGGTCA CGTACATCGA GCCGATCACG TGGGAAGTGG TCGAGCGCAT CATCGCGAAG
GAGCGCCCGG ACGCGATCCT GCCGACGATG GGCGGCCAGA CCGCGCTGAA TTGCGCACTC
GATCTGCATC ACCACGGTGT GCTGGCAAAG TACAACGTCG AACTGATCGG CGCGTCACCG
GAAGCGATCG ATAAGGCCGA AGACCGTCAG AAGTTCAAGG ACGCGATGAC GAAAATCGGC
CTCGGCTCGG CGAAGTCGGG TATCGCGCAT TCGATGGAAG AGGCGATGCA CGTGCACGCG
GAAATCGCCG CGTTCACGGG GGGCAGCGGC TATCCCATCG TGATTCGTCC GTCGTTCACG
CTCGGCGGCT CGGGCGGCGG CATTGCATAC AACCGCGAAG AATTCGAAGA AATCTGCAAG
CGCGGTCTCG ACCTGTCGCC AACGCGCGAA CTGCTGATCG AAGAATCGCT GCTCGGCTGG
AAAGAGTACG AGATGGAAGT GGTTCGCGAC AAGCAGGACA ACTGCATTAT CGTGTGCTCG
ATCGAAAACC TCGACCCGAT GGGGATTCAC ACGGGCGACT CGATCACCGT CGCGCCGGCG
CAGACGCTCA CCGACAAGGA ATATCAGATC CTGCGTAACG CATCGCTTGC GGTGCTGCGC
GAGATCGGCG TCGACACGGG CGGCTCGAAC GTCCAGTTTT CGATCAACCC GAAAGACGGC
CGGATGATCG TGATCGAAAT GAACCCGCGT GTGTCGCGTT CGTCGGCGTT GGCGTCAAAG
GCGACGGGCT TCCCGATCGC GAAAGTCGCG GCGAAGCTCG CGGTCGGCTA CACGCTGGAC
GAGTTGAAGA ACGAAATCAC GGGCGGCCAG ACGCCGGCAT CGTTCGAACC GACGATCGAC
TACGTCGTCA CGAAGATTCC GCGTTTCGCG TTCGAGAAAT TCCGTGAAGC CGATCCGCGC
CTGACCACGC AGATGAAGTC GGTCGGCGAA GTGATGGCGA TCGGCCGCAC CTTCCAGGAG
TCGTTCCAGA AAGCGCTGCG TGGTCTGGAA GTCGGCGTCG ACGGTCTGGA CGAGAAGACG
ACCAGCCGCG ACGAAGTGAT CCGCGAGATC GGCGAGGCCG GTCCGGACCG TATCTGGTAC
GTCGGCGACG CATTCCGTCT GGGTCTCACG CAACAGGAAA TCTTCGAGGA AACGGCAATT
GATCCGTGGT TCCTCGCGCA GATCGAAGAG ATCATCCGCA AGGAAAAGGC GCTCGACGGC
CGTACGCTCG CGAGCCTCAC GAAGGAAGAG TTGCGCTATC TGAAGCAGAG CGGCTTCTCG
GATCGCCGCC TGGCCAGGCT GCTCGGCGTG ACGGGCGCCG ACGTGCGCAA GCGCCGCATC
GAACTGAACG TGCGTCCCGT GTACAAGCGC GTCGACACCT GCGCGGCCGA ATTCGCGACG
AAGACGGCGT ACATGTACTC GACCTACGAG GAAGAGTGCG AAGCGAATCC GACCAATAAC
AAGAAGATCA TGGTGCTGGG CGGCGGCCCG AACCGGATCG GCCAGGGCAT CGAGTTCGAC
TATTGCTGCG TGCATGCCGC GCTCGCGATG CGCGAAGACG GCTACGAAAC GATTATGGTC
AACTGCAACC CGGAGACCGT TTCGACCGAC TACGACACGT CGGACCGCCT GTACTTCGAG
CCGCTGACGC TCGAAGACGT GCTCGAAATC GTCGACAAGG AAAAGCCGCT CGGCGTGATC
GTTCAGTACG GCGGACAGAC GCCGCTGAAG CTCGCGCTCG ATCTGGAAGC GAACGGCGTG
CCGATCGTCG GTACATCGCC GGACATGATC GACGCCGCGG AAGACCGCGA GCGTTTCCAG
AAGCTGCTGC AAGACCTGGA CCTGCGCCAG CCGCCTAACC GCACGGCGCG CGCGGAAGAC
GAAGCGCTCA AGCTCGCCGA CGAAATCGGT TACCCGCTCG TCGTGCGTCC GTCGTACGTG
CTGGGCGGCC GGGCGATGGA AATCGTTCAC GAGCCGCGCG ATCTCGAACG CTATATGCGC
GAGGCCGTGA AGGTGTCGAA CGATTCGCCT GTGCTGCTCG ACCGTTTCCT GAACGACGCG
ATCGAATGCG ACGTCGACTG CATTTCGGAC GGCGACACGG TGTTCATCGG CGGGGTGATG
GAGCACATCG AACAGGCGGG CGTGCACTCG GGCGACTCGG CGTGCTCGCT GCCGCCGTAC
TCGCTGTCGA ACGAGACGGT TGCCGAACTC AAGCGCCAGA CAGGCGCGAT GGCGAAGGCA
CTGAACGTGA TCGGGCTGAT GAACGTGCAG TTCGCGATCC AGCAGGTGCC GCAAGCCGAC
GGCACGAAGC AGGACATCAT CTATGTGCTC GAAGTGAATC CTCGTGCGTC GCGTACGGTG
CCGTACGTGT CGAAAGCGAC GAGCCTGCCG CTCGCGAAAA TCGCTGCCCG TGCGATGGTC
GGCCAGAAGC TCGCGCAGCA AGGCGTCACG AAGGAAGTGA TTCCGCCGTA CTTCAGCGTG
AAGGAAGCGG TGTTCCCATT CGTCAAGTTC CCGGCCGTCG ACCCGGTACT CGGCCCGGAA
ATGCGTTCGA CGGGCGAAGT GATGGGCGTG GGCCAGACGT TCGGCGAAGC GCTCTTCAAG
TCGCAGCTCG CGGCAGGTTC GCGTCTGCCG GAATCGGGCA CGGTGCTGTT GACGGTGATG
GACGCCGATA AGCCGAAGGC CGTCGAAGTC GCCCGTATGC TGCACGAGTT GGGCTATCCG
CTCGTCGCGA CGAAGGGCAC GGCGGCGGCG ATCGAAGCGG CGGGTGTGCC CGTGCGTGTC
GTGAACAAGG TGAAGGACGG GCGTCCCCAC ATCGTCGACA TGATCAAGAA CGGCGAGATC
GCGCTGGTCT TCACGACCGT CGACGAAACG CGTGCCGCCA TCGCCGATTC GCGCTCGATC
CGCATGAGCG CGCAGGCGAA TAAGGTCACC TACTACACGA CGATGTCGGG TGCGCGCGCG
GCCGTTGAAG GTTTGCGTTA TCTGAAGGAT CTGGAAGTCT ATGATTTACA AGGACTCCAT
GCTCGCCTAA ACTAA
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| Protein sequence | MPKRTDIKSI LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPNT
AEVTYIEPIT WEVVERIIAK ERPDAILPTM GGQTALNCAL DLHHHGVLAK YNVELIGASP
EAIDKAEDRQ KFKDAMTKIG LGSAKSGIAH SMEEAMHVHA EIAAFTGGSG YPIVIRPSFT
LGGSGGGIAY NREEFEEICK RGLDLSPTRE LLIEESLLGW KEYEMEVVRD KQDNCIIVCS
IENLDPMGIH TGDSITVAPA QTLTDKEYQI LRNASLAVLR EIGVDTGGSN VQFSINPKDG
RMIVIEMNPR VSRSSALASK ATGFPIAKVA AKLAVGYTLD ELKNEITGGQ TPASFEPTID
YVVTKIPRFA FEKFREADPR LTTQMKSVGE VMAIGRTFQE SFQKALRGLE VGVDGLDEKT
TSRDEVIREI GEAGPDRIWY VGDAFRLGLT QQEIFEETAI DPWFLAQIEE IIRKEKALDG
RTLASLTKEE LRYLKQSGFS DRRLARLLGV TGADVRKRRI ELNVRPVYKR VDTCAAEFAT
KTAYMYSTYE EECEANPTNN KKIMVLGGGP NRIGQGIEFD YCCVHAALAM REDGYETIMV
NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VDKEKPLGVI VQYGGQTPLK LALDLEANGV
PIVGTSPDMI DAAEDRERFQ KLLQDLDLRQ PPNRTARAED EALKLADEIG YPLVVRPSYV
LGGRAMEIVH EPRDLERYMR EAVKVSNDSP VLLDRFLNDA IECDVDCISD GDTVFIGGVM
EHIEQAGVHS GDSACSLPPY SLSNETVAEL KRQTGAMAKA LNVIGLMNVQ FAIQQVPQAD
GTKQDIIYVL EVNPRASRTV PYVSKATSLP LAKIAARAMV GQKLAQQGVT KEVIPPYFSV
KEAVFPFVKF PAVDPVLGPE MRSTGEVMGV GQTFGEALFK SQLAAGSRLP ESGTVLLTVM
DADKPKAVEV ARMLHELGYP LVATKGTAAA IEAAGVPVRV VNKVKDGRPH IVDMIKNGEI
ALVFTTVDET RAAIADSRSI RMSAQANKVT YYTTMSGARA AVEGLRYLKD LEVYDLQGLH
ARLN
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